GitHub action run pipeline #28
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add step to uncompress images
add docker readme
specify path for data into docker container create data dir move data path absolute path try home dir try with workspace variable create galexy dir move pip install into dependency dockerfile switch github action for testing to run inside container build and push dependency docker image on merge to main test main docker push action try volume mounting w/ rw option github location try passing user root into container remove cd command specify location for checked out code specify loc for test & run pipeline command try setting shell try user root with built docker container mount volume for data add python packages to path allow current user to map to container user pass user into docker run command? remove the UID build args add venv remove build-arg apt install venv need root user use bash for source venv add wheel to venv add numpy first in install order try root user again remove dependencies that are now in other dockerfile add source venv to bashrc remove source call source the activate script at top of script grab all the test data see output from pipeline run test pull ubuntu image first debug debug 2 debug set output path on home dir match output fname update docker readme attempt to cache the raw images closes #26 create separate download script for test data test cacheing this download data specify correct bash script name re-enable pipeline in github action only test the pipeline end to end on pull requests and pushes to main/develop branches
… pipeline isn't running
falkben
commented
Jun 9, 2021
Merged
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