Issue with launching cellxgene when anndata object has boolean metadata

[shayanhoss]

Issue with launching cellxgene when anndata object has boolean metadata

[bkmartinjr]

If it is feasible, we would love to have a test dataset that triggers this issue.

You may want to join the cziscience slack (#cellxgene-users or #cellxgene-dev). Link is in the readme.

[fidelram]

The problem can be solved by either dropping any adata.obs columns that are boolean or by setting those columns as categorical. To reproduce, simple add an adata.obs column as boolean. For example: adata.obs['test'] = adata.obs.n_counts < 10

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On Sat, Nov 17, 2018 at 3:08 AM Bruce Martin ***@***.***> wrote: If it is feasible, we would love to have a test dataset that triggers this issue. You may want to join the cziscience slack (#cellxgene-users or #cellxgene-dev). Link is in the readme. — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#457 (comment)>, or mute the thread </~https://github.com/notifications/unsubscribe-auth/AEu_1WMj3zlHKO9Jdoj-MDLrHt025yz7ks5uv2-hgaJpZM4YnMNr> .