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rgi

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beiko-lab / arete

AMR/VF LGT focused bacterial genomics analysis workflow

pipeline nextflow reproducible-research metagenomics virulence-factor recombination pangenomics rgi antimicrobial-resistance lateral-gene-transfer mobile-genetic-elements bacterial-genome-analysis antimicrobial-genes-annotation genomic-islands-prediction poppunk

Updated Jan 29, 2025
Python

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