Panacus is a tool for computing statistics for GFA-formatted pangenome graphs
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Feb 24, 2025 - Rust
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pangenomics
Here are 5 public repositories matching this topic...
GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.
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Feb 19, 2025 - Rust
Optimal sequence-to-graph alignment with recombinations
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Feb 26, 2025 - Rust
Compares pangenome graphs by calculating the segmentation distance between two GFA (Graphical Fragment Assembly) files.
distance distance-measures variation-graph distance-calculation pangenomics pangenome graph-distance variation-graphs pangenome-graph
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Jan 20, 2025 - Rust
Optimal sequence-to-graph alignment with recombinations using wavefront algorithm.
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Jul 28, 2023 - Rust
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