A tool for representing genomic potential and transcriptomic expression into KEGG pathways
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Jul 28, 2024 - Python
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kegg-pathway
Here are 11 public repositories matching this topic...
PETAL (ParallEl paThways AnaLyzer): a Python tool for deep biological pathway analysis
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Dec 28, 2022 - Python
Library for KEGG pathway enrichment analysis
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Feb 28, 2025 - Python
Overrepresentation analysis for KEGG and PID pathways using community detection
analysis pid gene-expression networks pathway-analysis kegg-pathway enrichment-analysis pathway detection-network
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Jan 7, 2018 - Python
An HTML parser for "KEGG Mapper – Reconstruct Result" pages
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Nov 30, 2021 - Python
"Pathway_Feature_Identification.py" is a script for analyzing microbial genomic data, identifying antimicrobial resistance-associated pathways using KEGG data, and applying logistic regression for feature selection.
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Feb 12, 2024 - Python
Repository for the presentation of work developed by the student Duarte Velho for the UC Project, of the Master in Bioinformatics of the University of Minho, academic year 23-24.
metagenomics interactivity differential-expression kegg-pathway metatranscriptomics kegg-ortholog bioinformatics-tool dynamic-html metabolic-pathways-mapping keggcharter
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Jun 19, 2024 - Python
KEGG-Chem is a Python program designed to retrieve KEGG compounds and associated data using an input of KEGG orthologues or modules, and can also retrieve SMILES, SDF files, and more from PubChem.
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Jul 30, 2024 - Python
🤝 Tool for generating KEGG pathways completeness heatmaps from eggNOG-mapper annotations
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Feb 20, 2025 - Python
A Python script for efficiently retrieving and organizing module-related data from the KEGG database, including entries, symbols, pathway IDs, and names.
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Dec 9, 2023 - Python
Application of KEGG pathway for DRF
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May 9, 2022 - Python
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