Long short-term memory recurrent neural networks for learning peptide and protein sequences to later design new, similar examples.
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Mar 25, 2023 - Python
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denovo
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This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye Rozov, Aya Brown Kav, David Bogumil, Naama Shterzer, Eran Halperin, Itzhak Mizrahi, and Ron Shamir
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Apr 22, 2021 - Python
Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
machine-learning topology neural-network hpc pdb protein-structure dataset ab-initio amino-acids denovo protein-design rmsd denovo-design
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Jan 3, 2022 - Python
Implementation of the paper - Automatic chemical design using a data-driven continuous representation of molecules
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Mar 29, 2021 - Python
A bare metal Python library for building and manipulating protein molecular structures
python bioinformatics topology game-engine proteins pdb numpy protein-structure molecule computational-biology protein molecular-simulation amino-acids denovo protein-design pose biomolecule biomolecular-simulation denovo-design
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Feb 14, 2025 - Python
Tortoise is the CPU workflow of the HAT /~https://github.com/TNTurnerLab/HAT tools.
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Nov 9, 2023 - Python
Statistical models for finding de novo recurrence and compound heterozygosity across rare disease patient cohorts
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Aug 13, 2024 - Python
De novo identification of LTR retrotransposons
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Feb 16, 2019 - Python
Deep Learning for Chem
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May 17, 2020 - Python
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