Open-source usearch
memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping
Protein structure alignment and search algorithm
Fast and simple algorithms for computing both LCSk and LCSk+
Official code repository for JAX-CNV
CONTRAfold-SE - Learning RNA secondary structure (only) from structure probing data
Answer to "Bioinformatics Algorithms" Book Coding Problems
Very fast and efficient detection of multiple overlaps between genomic regions. For details on the algorithm and the implementation, please refer to the following publication: Aszódi, A. (2012): MULTOVL: Fast multiple overlaps of genomic regions. Bioinformatics 28: 3318-3319.
Bio informatics course materials for NEUB students.
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