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I was running a WARP pipeline by the Broad GATK team, and I keep hitting the following error:
Could not build the path "xxx". It may refer to a filesystem not supported by this instance of Cromwell. Supported filesystems are: HTTP, MacOSXFileSystem. Failures:
HTTP: xxx does not have an http or https scheme (IllegalArgumentException)
I dug through the different gcs backend parameters and found that the pipeline was looking for an "engine" parameter. After adding in the following snippet to backend-file, I was able to get caper and the WARP pipeline to work. Would it be possible to add the engine to caper's default configuration?
I was running a
WARP
pipeline by the Broad GATK team, and I keep hitting the following error:I dug through the different gcs backend parameters and found that the pipeline was looking for an "engine" parameter. After adding in the following snippet to backend-file, I was able to get
caper
and the WARP pipeline to work. Would it be possible to add the engine tocaper
's default configuration?The text was updated successfully, but these errors were encountered: