Sfitz external parse bam #718
sorelfitzgibbon
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9 errors and 1 warning
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CICD-base:
input/example-test.yaml#L6
6:7 [indentation] wrong indentation: expected 4 but found 6
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CICD-base:
input/example-test.yaml#L8
8:7 [indentation] wrong indentation: expected 4 but found 6
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CICD-base:
input/call-sSNV-template-overwrite.yaml#L6
6:7 [indentation] wrong indentation: expected 4 but found 6
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CICD-base:
input/call-sSNV-template-overwrite.yaml#L8
8:7 [indentation] wrong indentation: expected 4 but found 6
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CICD-base:
input/example-test-multi-sample.yaml#L6
6:7 [indentation] wrong indentation: expected 4 but found 6
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CICD-base:
input/example-test-multi-sample.yaml#L8
8:7 [indentation] wrong indentation: expected 4 but found 6
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CICD-base:
input/example-test-multi-sample.yaml#L10
10:7 [key-duplicates] duplication of key "BAM" in mapping
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CICD-base:
input/example-test-multi-sample.yaml#L11
11:7 [key-duplicates] duplication of key "contamination_table" in mapping
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CICD-base:
input/example-test-tumor-only.yaml#L5
5:7 [indentation] wrong indentation: expected 4 but found 6
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CICD-base
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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