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Merge branch 'master' of github.com:tobiasrausch/ATACseq
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tobiasrausch committed Oct 13, 2021
2 parents a5234bd + 3be7691 commit 50fceaf
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2 changes: 1 addition & 1 deletion src/atac.sh
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Expand Up @@ -39,7 +39,7 @@ ${BASEDIR}/peaks.sh ${OUTP}.pseudorep1.bam ${OUTP}.pseudorep2.bam ${HG} ${OUTP}
rm ${OUTP}.pseudorep1.bam ${OUTP}.pseudorep1.bam.bai ${OUTP}.pseudorep2.bam ${OUTP}.pseudorep2.bam.bai

# Footprints
${BASEDIR}/footprints.sh ${ATYPE} ${HG} ${OUTP}.final.bam ${OUTP}
#${BASEDIR}/footprints.sh ${ATYPE} ${HG} ${OUTP}.final.bam ${OUTP}

# Aggregate key QC metrics
${BASEDIR}/qc_globber.sh ${OUTP}
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