ci: add codecov token

rformassspectrometry · Jan 16, 2025 · 6f019fa · 6f019fa
1 parent b99a42e
commit 6f019fa
Showing 1 changed file with 5 additions and 5 deletions.
diff --git a/.github/workflows/check-bioc.yml b/.github/workflows/check-bioc.yml
@@ -39,7 +39,7 @@ env:
   run_pkgdown: 'true'
   has_RUnit: 'false'
   has_BiocCheck: 'false'
-  cache-version: 'cache-v1'
+  cache-version: 'cache-v3'
 
 jobs:
   build-check:
@@ -52,9 +52,9 @@ jobs:
       fail-fast: false
       matrix:
         config:
-          - { os: ubuntu-latest, r: 'devel', bioc: '3.19', cont: "bioconductor/bioconductor_docker:devel", rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest" }
-          - { os: macOS-latest, r: 'next', bioc: '3.19'}
-          - { os: windows-latest, r: 'next', bioc: '3.19'}
+          - { os: ubuntu-latest, r: 'devel', bioc: '3.21', cont: "bioconductor/bioconductor_docker:devel", rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest" }
+          - { os: macOS-latest, r: '4.4', bioc: '3.20'}
+          - { os: windows-latest, r: '4.4', bioc: '3.20'}
     env:
       R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
       RSPM: ${{ matrix.config.rspm }}
@@ -249,7 +249,7 @@ jobs:
       - name: Test coverage
         if: github.ref == 'refs/heads/main' && env.run_covr == 'true' && runner.os == 'Linux'
         run: |
-          covr::codecov()
+          covr::codecov(token = "${{ secrets.CODECOV_TOKEN }}")
         shell: Rscript {0}
 
       - name: Install package