v1.6.0

[1.6.0] 30-11-2024

Added

• Additional terms for "tailoring" controlled vocabulary: 'Sulfonation', 'Ring contraction', 'Ring expansion'

v1.5.1

[1.5.1] 09-11-2024

Changed

• Reaction: made "description" of reaction examples optional for backward compatibility
• Made DOI pattern matching less stringent

v1.5.0

[1.5.0] 08-11-2024

Changed

• Changelog: flattened structure, changed identifiers to ORCID, changed versioning to major alone (before 'major.minor')
• Evidence: flattened structure to a single object (before: a list of objects)
• Reaction database IDs: flattened structure, changed formatting of EC to the code (e.g. 1.2.3.4) alone (before: string had to start with 'EC'), drop MITE crosslinks
• References: removed non-peristing reference types, only DOI allowed (before: url, pubmed, patent)
• Tailoring reaction terms: removed 'FADH2 supply for chlorination' since it is not tailoring per se
• Status: removed 'embargoed' specification

v1.4.1

[1.4.1] 08-10-2024

Changed

• CLI: added support for multiple input files checking at once

v1.4

[1.4] 08-10-2024

Added

• CLI: returns exit code 0 when file passes, returns 1 if file does not pass

Changed

• schema/entry: removed "quality" flag due to lack of objectiveness (all MITE entries were set to medium; difficult to define quality objectively)
• schema/reactions: removed "isBalanced" flag since this information is already contained in the reaction SMARTS/SMILES
• schema/reactions: removed "isIterative" flag: was not used by any entry so far, reaction SMARTS can be applied

v1.3

[1.3] 11-08-2024

Changed

• schema/reactions: 'databaseIds' accepts now arrays of strings (before: a single string, see also v1.1). This allows to e.g. specify multiple MITE cross-references instead of a single one.

v1.2

[1.2] 07-08-2024

Changed

• Made minimum Python version more permissive

v1.1

[1.1] 05-08-2024

Changed

• schema/enzyme: 'databaseIds' is now an object, with allowed database cross-links as keys (before: an array of database-crosslinks)
• schema/reactions: 'databaseIds' is now an object, with allowed database cross-links as keys (before: an array of database-crosslinks)