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[WebDataset] Support compressed files (#6931)
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* support compressed files for in webdataset

* ignore windows behavior

* again
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lhoestq authored May 29, 2024
1 parent 670e1cf commit 88d53d1
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Showing 4 changed files with 57 additions and 12 deletions.
16 changes: 6 additions & 10 deletions src/datasets/features/features.py
Original file line number Diff line number Diff line change
Expand Up @@ -312,21 +312,17 @@ def _cast_to_python_objects(obj: Any, only_1d_for_numpy: bool, optimize_list_cas
True,
)
elif config.TORCH_AVAILABLE and "torch" in sys.modules and isinstance(obj, torch.Tensor):
if obj.dtype == torch.bfloat16:
return _cast_to_python_objects(
obj.detach().to(torch.float).cpu().numpy(),
only_1d_for_numpy=only_1d_for_numpy,
optimize_list_casting=optimize_list_casting,
)[0], True
if obj.ndim == 0:
return obj.detach().cpu().numpy()[()], True
elif not only_1d_for_numpy or obj.ndim == 1:
return obj.detach().cpu().numpy(), True
else:
if obj.dtype == torch.bfloat16:
return (
[
_cast_to_python_objects(
x, only_1d_for_numpy=only_1d_for_numpy, optimize_list_casting=optimize_list_casting
)[0]
for x in obj.detach().to(torch.float).cpu().numpy()
],
True,
)
return (
[
_cast_to_python_objects(
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17 changes: 15 additions & 2 deletions src/datasets/packaged_modules/webdataset/webdataset.py
Original file line number Diff line number Diff line change
Expand Up @@ -3,11 +3,13 @@
from itertools import islice
from typing import Any, Callable, Dict, List

import fsspec
import numpy as np
import pyarrow as pa

import datasets
from datasets.features.features import cast_to_python_objects
from datasets.utils.file_utils import SINGLE_FILE_COMPRESSION_EXTENSION_TO_PROTOCOL, xbasename


logger = datasets.utils.logging.get_logger(__name__)
Expand All @@ -23,6 +25,8 @@ class WebDataset(datasets.GeneratorBasedBuilder):
@classmethod
def _get_pipeline_from_tar(cls, tar_path, tar_iterator):
current_example = {}
fs: fsspec.AbstractFileSystem = fsspec.filesystem("memory")
streaming_download_manager = datasets.StreamingDownloadManager()
for filename, f in tar_iterator:
if "." in filename:
example_key, field_name = filename.split(".", 1)
Expand All @@ -32,8 +36,17 @@ def _get_pipeline_from_tar(cls, tar_path, tar_iterator):
current_example["__key__"] = example_key
current_example["__url__"] = tar_path
current_example[field_name.lower()] = f.read()
if field_name.split(".")[-1] in cls.DECODERS:
current_example[field_name] = cls.DECODERS[field_name.split(".")[-1]](current_example[field_name])
if field_name.split(".")[-1] in SINGLE_FILE_COMPRESSION_EXTENSION_TO_PROTOCOL:
fs.write_bytes(filename, current_example[field_name.lower()])
extracted_file_path = streaming_download_manager.extract(f"memory://{filename}")
with fsspec.open(extracted_file_path) as f:
current_example[field_name.lower()] = f.read()
fs.delete(filename)
data_extension = xbasename(extracted_file_path).split(".")[-1]
else:
data_extension = field_name.split(".")[-1]
if data_extension in cls.DECODERS:
current_example[field_name] = cls.DECODERS[data_extension](current_example[field_name])
if current_example:
yield current_example

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3 changes: 3 additions & 0 deletions src/datasets/utils/file_utils.py
Original file line number Diff line number Diff line change
Expand Up @@ -762,6 +762,9 @@ def readline(f: io.RawIOBase):
# archive compression
"zip": "zip",
}
SINGLE_FILE_COMPRESSION_EXTENSION_TO_PROTOCOL = {
fs_class.extension.lstrip("."): fs_class.protocol for fs_class in COMPRESSION_FILESYSTEMS
}
SINGLE_FILE_COMPRESSION_PROTOCOLS = {fs_class.protocol for fs_class in COMPRESSION_FILESYSTEMS}
SINGLE_SLASH_AFTER_PROTOCOL_PATTERN = re.compile(r"(?<!:):/")

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33 changes: 33 additions & 0 deletions tests/packaged_modules/test_webdataset.py
Original file line number Diff line number Diff line change
Expand Up @@ -10,6 +10,16 @@
from ..utils import require_pil, require_sndfile, require_torch


@pytest.fixture
def gzipped_text_wds_file(tmp_path, text_gz_path):
filename = tmp_path / "file.tar"
num_examples = 3
with tarfile.open(str(filename), "w") as f:
for example_idx in range(num_examples):
f.add(text_gz_path, f"{example_idx:05d}.txt.gz")
return str(filename)


@pytest.fixture
def image_wds_file(tmp_path, image_file):
json_file = tmp_path / "data.json"
Expand Down Expand Up @@ -64,6 +74,29 @@ def tensor_wds_file(tmp_path, tensor_file):
return str(filename)


@require_pil
def test_gzipped_text_webdataset(gzipped_text_wds_file, text_path):
data_files = {"train": [gzipped_text_wds_file]}
webdataset = WebDataset(data_files=data_files)
split_generators = webdataset._split_generators(DownloadManager())
assert webdataset.info.features == Features(
{
"__key__": Value("string"),
"__url__": Value("string"),
"txt.gz": Value("string"),
}
)
assert len(split_generators) == 1
split_generator = split_generators[0]
assert split_generator.name == "train"
generator = webdataset._generate_examples(**split_generator.gen_kwargs)
_, examples = zip(*generator)
assert len(examples) == 3
assert isinstance(examples[0]["txt.gz"], str)
with open(text_path, "r") as f:
assert examples[0]["txt.gz"].replace("\r\n", "\n") == f.read().replace("\r\n", "\n")


@require_pil
def test_image_webdataset(image_wds_file):
import PIL.Image
Expand Down

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