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[pre-commit.ci] auto fixes from pre-commit.com hooks
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from glotaran.io import load_dataset, load_parameters, load_scheme | ||
from __future__ import annotations | ||
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from pathlib import Path | ||
from pytest import approx | ||
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from pyreporoot import project_root | ||
from pytest import approx | ||
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from glotaran.io import load_dataset | ||
from glotaran.io import load_parameters | ||
from glotaran.io import load_scheme | ||
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repo_root = Path(project_root(__file__, root_files=[".git", "pyproject.toml"])) | ||
example_folder = repo_root / "examples/01-fluorescence" | ||
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def test_01_fluorescence(): | ||
fit_scheme = load_scheme(example_folder/"scheme.yaml", format_name="yml") | ||
parameters = load_parameters(example_folder/"parameters.yaml") | ||
data_path = example_folder/"data/data.ascii" | ||
fit_scheme = load_scheme(example_folder / "scheme.yaml", format_name="yml") | ||
parameters = load_parameters(example_folder / "parameters.yaml") | ||
data_path = example_folder / "data/data.ascii" | ||
fit_scheme.load_data({"dataset1": load_dataset(data_path)}) | ||
result = fit_scheme.optimize(parameters=parameters) | ||
assert result is not None | ||
assert result.data['dataset1'].root_mean_square_error == approx(43.98496093) | ||
assert result.data["dataset1"].root_mean_square_error == approx(43.98496093) | ||
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if __name__ == "__main__": | ||
test_01_fluorescence() | ||
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