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Feature/llm llama index 1#159

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dermatologist merged 22 commits intodevelopdermatologist/pyomop:developfrom feature/llm-llama-index-1dermatologist/pyomop:feature/llm-llama-index-1Copy head branch name to clipboardJan 6, 2024

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Commits

Commits on Jan 5, 2024

• Add 'llm' to setup.cfg

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• Add LLMQueryEngine class to pyomop package

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• Add CdmLLMQuery class to pyomop package

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• Add test for creating a cohort and querying it using CdmLLMQuery

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• Add SQLDatabase class for interacting with a SQL database

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• Fix import statements in llm_query.py and test_e_llm_query.py

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• Add langchain dependency and import asyncio

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• Refactor SQLDatabase setup method

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• Refactor SQLDatabase class and update imports

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• Remove unused code and add overrides to setup.cfg

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• Update SQL wrapper and embed model in LLM engine and query

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• Refactor SQLDatabase class to improve readability and maintainability

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• Refactor llm query code

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• Update LLN query to show each cohort with a subject id of 100

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Commits on Jan 6, 2024

• Add conditional check for running in CI environment

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• Add LLM example and import CDMDatabase

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• Add support for LLM based natural language queries using llama-index

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• Refactor test_e_llm_query.py and add datetime import

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• Add logging and import error handling to __init__.py

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• Add CI environment variable and update condition in test_e_llm_query.py

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• Fix LLM query import error

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• Refactor LLM query code

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