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Update ruff and run ruff format #1446

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Run time

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Job	Run time
Ubuntu / 3.9	1m 4s
Ubuntu / 3.10	1m 9s
Ubuntu / 3.11	1m 12s
Ubuntu / 3.12	1m 11s
Ubuntu / 3.13	1m 49s
MacOS / 3.9	2m 12s
MacOS / 3.10	1m 24s
MacOS / 3.11	1m 17s
MacOS / 3.12	1m 51s
MacOS / 3.13	2m 17s
Windows / 3.9	2m 14s
Windows / 3.10	2m 21s
Windows / 3.11	3m 40s
Windows / 3.12	2m 10s
Windows / 3.13	6m 27s
	32m 18s