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Remove beta tag WDL CI #1658: Commit e347039 pushed by lvreynoso
November 9, 2023 00:51 47s lvreynoso/fix_missing_passed_filters_reads
lvreynoso/fix_missing_passed_filters_reads
November 9, 2023 00:51 47s
Lint and add comments WDL CI #1657: Commit 701a10a pushed by lvreynoso
November 9, 2023 00:45 5m 44s lvreynoso/fix_missing_passed_filters_reads
lvreynoso/fix_missing_passed_filters_reads
November 9, 2023 00:45 5m 44s
Add unit test and test data for RunRedup task WDL CI #1656: Commit 0ba1242 pushed by lvreynoso
November 9, 2023 00:36 1m 10s lvreynoso/fix_missing_passed_filters_reads
lvreynoso/fix_missing_passed_filters_reads
November 9, 2023 00:36 1m 10s
Merge branch 'main' into tmorse-nt-compression WDL CI #1655: Commit aa33a83 pushed by phoenixAja
November 8, 2023 20:25 11m 5s tmorse-nt-compression
tmorse-nt-compression
November 8, 2023 20:25 11m 5s
check if phage name contains 'phage' (#304) WDL CI #1654: Commit c4d7b9c pushed by ninabernick
November 8, 2023 19:58 17m 6s main
main
November 8, 2023 19:58 17m 6s
whole word match phage WDL CI #1653: Commit a26579d pushed by ninabernick
November 8, 2023 19:51 10m 22s ninabernick/phage_name
ninabernick/phage_name
November 8, 2023 19:51 10m 22s
add lineage output files WDL CI #1652: Commit 9af5002 pushed by phoenixAja
November 8, 2023 19:12 3m 51s tmorse-nt-compression
tmorse-nt-compression
November 8, 2023 19:12 3m 51s
save paths from step outputs WDL CI #1651: Commit 9e8da5f pushed by phoenixAja
November 8, 2023 18:31 2m 38s tmorse-nt-compression
tmorse-nt-compression
November 8, 2023 18:31 2m 38s
formatting' WDL CI #1650: Commit 2902992 pushed by ninabernick
November 6, 2023 23:43 14m 27s ninabernick/phage_name
ninabernick/phage_name
November 6, 2023 23:43 14m 27s
check if phage name contains 'phage' WDL CI #1649: Commit e40000e pushed by ninabernick
November 6, 2023 23:41 1m 2s ninabernick/phage_name
ninabernick/phage_name
November 6, 2023 23:41 1m 2s
reformat descriptions (#302) WDL CI #1648: Commit b1d060e pushed by ninabernick
November 2, 2023 00:20 21m 37s main
main
November 2, 2023 00:20 21m 37s
WIP: long read runs skip over taxon removal WDL CI #1647: Commit fb5888b pushed by vincent-czi
November 2, 2023 00:06 29m 43s vince/czid-7790-ont-viz-tweak
vince/czid-7790-ont-viz-tweak
November 2, 2023 00:06 29m 43s
Merge branch 'main' into ninabernick/ont_step_descriptions WDL CI #1646: Commit a47583b pushed by ninabernick
November 1, 2023 22:31 17m 17s ninabernick/ont_step_descriptions
ninabernick/ont_step_descriptions
November 1, 2023 22:31 17m 17s
[CZID-8813] assign is_phage based on family name (#303) WDL CI #1645: Commit c6e2c05 pushed by ninabernick
November 1, 2023 22:31 18m 2s main
main
November 1, 2023 22:31 18m 2s
Merge branch 'main' into ninabernick/fix_phage_categorization WDL CI #1644: Commit 0704c7b pushed by ninabernick
November 1, 2023 22:01 13m 50s ninabernick/fix_phage_categorization
ninabernick/fix_phage_categorization
November 1, 2023 22:01 13m 50s
Merge remote-tracking branch 'origin/main' into lvreynoso/fix_missing… WDL CI #1643: Commit 27b1598 pushed by lvreynoso
November 1, 2023 20:30 17m 29s lvreynoso/fix_missing_passed_filters_reads
lvreynoso/fix_missing_passed_filters_reads
November 1, 2023 20:30 17m 29s
Import test fixes WDL CI #1642: Commit 8028ce7 pushed by lvreynoso
November 1, 2023 20:30 49s lvreynoso/fix_missing_passed_filters_reads
lvreynoso/fix_missing_passed_filters_reads
November 1, 2023 20:30 49s
[CZID-8703] [CZID-8778] log taxa and number of lines in index generat… WDL CI #1641: Commit 24a648b pushed by ninabernick
November 1, 2023 20:21 14m 58s main
main
November 1, 2023 20:21 14m 58s
formatting WDL CI #1640: Commit 0d07d11 pushed by ninabernick
November 1, 2023 18:29 17m 19s ninabernick/test_number_lines
ninabernick/test_number_lines
November 1, 2023 18:29 17m 19s
log superkingdom WDL CI #1639: Commit 7081939 pushed by ninabernick
November 1, 2023 18:27 1m 24s ninabernick/test_number_lines
ninabernick/test_number_lines
November 1, 2023 18:27 1m 24s
formatting WDL CI #1638: Commit e777b26 pushed by ninabernick
November 1, 2023 17:56 15m 12s ninabernick/fix_phage_categorization
ninabernick/fix_phage_categorization
November 1, 2023 17:56 15m 12s
assign phage based on family name WDL CI #1637: Commit 480bbb0 pushed by ninabernick
November 1, 2023 17:53 1m 25s ninabernick/fix_phage_categorization
ninabernick/fix_phage_categorization
November 1, 2023 17:53 1m 25s
[CZID-8703] unit test lineages csv generation (#298) WDL CI #1636: Commit 362a9e1 pushed by rzlim08
October 31, 2023 18:29 14m 21s 62dc96a
62dc96a
October 31, 2023 18:29 14m 21s
reformat descriptions WDL CI #1635: Commit 634e145 pushed by ninabernick
October 31, 2023 16:21 22m 12s ninabernick/ont_step_descriptions
ninabernick/ont_step_descriptions
October 31, 2023 16:21 22m 12s
Remove use of subsampled reads WDL CI #1634: Commit d7def8e pushed by lvreynoso
October 30, 2023 19:09 6m 16s lvreynoso/no_amr_subsampling
lvreynoso/no_amr_subsampling
October 30, 2023 19:09 6m 16s