-
Notifications
You must be signed in to change notification settings - Fork 3.3k
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
test run_conda_forge_build_setup on GitHub Actions
- Loading branch information
1 parent
16fbbf3
commit 86cb5c7
Showing
1 changed file
with
88 additions
and
0 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,88 @@ | ||
name: PR (osx-arm64) | ||
on: | ||
pull_request: | ||
types: [opened, synchronize, reopened] | ||
concurrency: | ||
group: build-${{ github.event.pull_request.number || github.head_ref }} | ||
cancel-in-progress: true | ||
jobs: | ||
build_and_test-osx-arm64: | ||
name: Build and Test OSX-ARM64 | ||
runs-on: macOS-14 # M1 | ||
strategy: | ||
fail-fast: true | ||
max-parallel: 13 | ||
steps: | ||
- uses: actions/checkout@v4 | ||
with: | ||
fetch-depth: 0 | ||
|
||
# bail if there's no osx-arm64 recipes | ||
- name: Check for Additional Platforms | ||
id: additional_platforms | ||
run: | | ||
result=$(./scripts/check-for-additional-platforms.sh "origin/master...HEAD" "build_and_test" "${GITHUB_JOB}") | ||
if [[ ${result} != "build" ]] | ||
then | ||
echo "No recipes using this platform, skipping rest of job." | ||
echo "skip_build=true" >> $GITHUB_OUTPUT | ||
fi | ||
- name: set path | ||
run: echo "/opt/mambaforge/bin" >> $GITHUB_PATH | ||
|
||
- name: Fetch conda install script | ||
if: steps.additional_platforms.outputs.skip_build != 'true' | ||
run: | | ||
wget https://raw.githubusercontent.com/bioconda/bioconda-common/master/{install-and-set-up-conda,configure-conda,common}.sh | ||
- name: Set up bioconda-utils | ||
if: steps.additional_platforms.outputs.skip_build != 'true' | ||
run: bash install-and-set-up-conda.sh | ||
|
||
- name: Configure conda | ||
if: steps.additional_platforms.outputs.skip_build != 'true' | ||
run: bash configure-conda.sh | ||
|
||
- name: Build and Test | ||
if: steps.additional_platforms.outputs.skip_build != 'true' | ||
env: | ||
# Mimic circleci | ||
OSTYPE: "darwin" | ||
CI: "true" | ||
run: | | ||
set -e | ||
eval "$(conda shell.bash hook)" | ||
conda activate bioconda | ||
source common.sh | ||
run_conda_forge_build_setup | ||
if [ -z "$GITHUB_BASE_REF" ] ; then | ||
export GITHUB_BASE_REF="master" | ||
fi | ||
git fetch origin "$GITHUB_BASE_REF" | ||
bioconda-utils build recipes config.yml \ | ||
--lint --git-range origin/"$GITHUB_BASE_REF" HEAD | ||
- name: Prepare artifacts | ||
if: steps.additional_platforms.outputs.skip_build != 'true' | ||
run: | | ||
( | ||
rm -rf /tmp/artifacts | ||
mkdir -p /tmp/artifacts/packages | ||
cd /opt/mambaforge/envs/bioconda/conda-bld || exit 0 | ||
find -name .cache | xargs rm -rf || true | ||
for n in index.html channeldata.json osx-arm64 noarch; do | ||
cp -rv $n /tmp/artifacts/packages || true | ||
done | ||
) || true | ||
- name: Archive packages | ||
if: steps.additional_platforms.outputs.skip_build != 'true' | ||
uses: actions/upload-artifact@v4 | ||
with: | ||
name: osx-arm64-packages | ||
path: | | ||
/tmp/artifacts |