ensure secondary solve follows user selection

andersen-lab · Feb 10, 2025 · 7e47b37 · 7e47b37
1 parent c9a58d6
commit 7e47b37
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/freyja/sample_deconv.py b/freyja/sample_deconv.py
@@ -212,7 +212,7 @@ def solve_demixing_problem(df_barcodes, mix, depths, eps, adapt,
         constraints = [sum(x) == 1, x >= 0]
         prob = cp.Problem(cp.Minimize(cost), constraints)
         try:
-            prob.solve(verbose=False, solver=cp.ECOS)
+            prob.solve(verbose=False, solver=solver_)
         except cp.error.SolverError:
             raise ValueError('Solver error encountered, most'
                              'likely due to insufficient sequencing depth.'