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This repository has been archived by the owner on Oct 18, 2024. It is now read-only.

2.5.0.3

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@a-slide a-slide released this 27 Sep 11:31
· 87 commits to master since this release

This major update add new functionalities to pycoQC and improve a number of existing ones:

  • BAM files parsing
  • 8 new alignment specific plots
  • Updated json format including alignment information when available
  • Option to filter out duplicated reads due to Guppy over-calling (--filter_duplicated)
  • New tool to split summary sequencing file by barcodes
  • Improve HTML report layout and add list of source files at the end
  • Update documentation and demo notebooks
  • Add Codacity integration