Merge pull request #297 from Clinical-Genomics/update_panel_name_in_r…

…eport

Fix updating gene panel name displayed on report page

CHANGELOG.md

@@ -1,6 +1,7 @@
 ## [unreleased]
 ### Fixed
 - Position of `Show genes` checkbox on report page
+- Updating gene panel name using the web form on report page
 
 ## [1.6]
 ### Added

src/chanjo2/meta/handle_report_contents.py

@@ -86,7 +86,10 @@ def get_report_data(
             "default_level": query.default_level,
             "interval_type": query.interval_type.value,
             "case_name": query.case_display_name,
-            "hgnc_gene_ids": [gene.hgnc_id for gene in genes],
+            "hgnc_gene_ids": [gene.hgnc_id for gene in genes]
+            or query.hgnc_gene_ids
+            or query.hgnc_gene_symbols
+            or query.ensembl_gene_ids,
             "build": query.build.value,
             "completeness_thresholds": query.completeness_thresholds,
             "samples": [_serialize_sample(sample) for sample in query.samples],

src/chanjo2/templates/report.html

@@ -41,7 +41,7 @@ <h2 class="accordion-header" id="flush-headingOne">
 
 				<div class="col-6">
 				  <label class="form-label">Gene panel name to display</label>
-				  <input class="form-control" id="panel_name" type="text" placeholder="Skeletal dysplasia 3.2" value="{{ extras.panel_name or '' }}">
+				  <input class="form-control" id="panel_name" name="panel_name" type="text" placeholder="Skeletal dysplasia 3.2" value="{{ extras.panel_name or '' }}">
 				</div>
 			  </div>
 			</div>