Improve notebook text

docs/boundary_forcing.ipynb

@@ -25,9 +25,7 @@
    "id": "a65f0b74-cf3d-4615-9fad-ed1687527f18",
    "metadata": {},
    "source": [
-    "\n",
-    "\n",
-    "As always, the first step is to create our grid. Note that it is important to use the same grid throughout all the steps (i.e., creating tidal forcing, surface forcing, initial conditions, etc.) to set up a consistent ROMS simulation. Here we use the following grid."
+    "As always, the first step is to create our grid."
    ]
   },
   {
@@ -126,7 +124,13 @@
    "id": "795b828b-6a33-4804-a1f6-52eb85f5f373",
    "metadata": {},
    "source": [
-    "Note that we could have also specified the data location via a wildcard, e.g., `path='/glade/derecho/scratch/bachman/GLORYS/NA/2012/*.nc'`. But with this latter choice, `ROMS-Tools` will operate quite a bit slower. More specific filenames are better!"
+    "<div class=\"alert alert-info\">\n",
+    "\n",
+    "Note\n",
+    "\n",
+    "We could have also specified the data location via a wildcard, e.g., `glorys_path=\"/global/cfs/projectdirs/m4746/Datasets/GLORYS/NA/2012/*.nc\"`. But with this latter choice, `ROMS-Tools` will operate quite a bit slower. More specific filenames are better!\n",
+    "\n",
+    "</div>"
    ]
   },
   {

docs/initial_conditions.ipynb

@@ -25,7 +25,7 @@
    "id": "3f881256-8f95-4fb1-9511-8a7dd773d420",
    "metadata": {},
    "source": [
-    "We start by creating a grid. Note that it is important to use the same grid throughout all the steps (i.e., creating tidal forcing, atmospheric forcing, initial conditions, etc.) to set up a consistent ROMS simulation. Here, we use the following grid with the default parameters for the vertical coordinate system."
+    "We start by creating a grid."
    ]
   },
   {
@@ -100,7 +100,13 @@
    "id": "2ed27d93-95aa-4c82-8688-ddcdb6c75825",
    "metadata": {},
    "source": [
-    "Note that it would also be okay to provide a filename that contains data for more than just the day of interest. `ROMS-Tools` will pick out the correct day (and complain if the day of interest is not in the provided filename.) Or we can even use wildcards, such as `filename='/glade/derecho/scratch/bachman/GLORYS/NA/2012/*.nc'`. Note, however, that `ROMS-Tools` will operate more efficiently when the filename is as specific as possible."
+    "<div class=\"alert alert-info\">\n",
+    "\n",
+    "Note\n",
+    "\n",
+    "It would also be okay to provide a filename that contains data for more than just the day of interest. `ROMS-Tools` will pick out the correct day (and complain if the day of interest is not in the provided filename.) Or we can even use wildcards, such as `path=\"/global/cfs/projectdirs/m4746/Datasets/GLORYS/NA/2012/*.nc\"`. Note, however, that `ROMS-Tools` will operate more efficiently when the filename is as specific as possible.\n",
+    "    \n",
+    "</div>"
    ]
   },
   {

docs/surface_forcing.ipynb

@@ -25,7 +25,7 @@
    "id": "f6338e0b-7858-4121-a2ee-7550e639607b",
    "metadata": {},
    "source": [
-    "As always, the first step is to create our grid. Note that it is important to use the same grid throughout all the steps (i.e., creating tidal forcing, surface forcing, initial conditions, etc.) to set up a consistent ROMS simulation. Here we use the following grid."
+    "As always, the first step is to create our grid."
    ]
   },
   {
@@ -1854,7 +1854,13 @@
    "id": "f47568cf-9595-4e3c-9349-6bd7ab4d2bdd",
    "metadata": {},
    "source": [
-    "The `time` variable shows relative time, i.e., days since the model reference date (here set to January 1, 2000 by default). The `abs_time` coordinate shows the absolute time. The ERA5 data provided to `ROMS-Tools` has hourly frequency; this temporal frequency is inherited by `surface_forcing`."
+    "<div class=\"alert alert-info\">\n",
+    "\n",
+    "Note\n",
+    "\n",
+    "The `time` variable shows relative time, i.e., days since the model reference date (here set to January 1, 2000 by default). The `abs_time` coordinate shows the absolute time. The ERA5 data provided to `ROMS-Tools` has hourly frequency; this temporal frequency is inherited by `surface_forcing`.\n",
+    "    \n",
+    "</div>"
    ]
   },
   {

docs/tides.ipynb

@@ -25,7 +25,7 @@
    "id": "0c3cd5fd-fbe0-42f9-acfe-1c227fd492ef",
    "metadata": {},
    "source": [
-    "We first create our grid object. Note that it is important to use the same grid throughout all the steps (i.e., creating tidal forcing, atmospheric forcing, initial conditions, etc.) to set up a consistent ROMS simulation. Here we use the following grid."
+    "We first create our grid object."
    ]
   },
   {