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@Bishop-Laboratory

Bishop Laboratory (@UT Health SA)

Multidisciplinary Research Team at UT Health SA

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  1. RLSeq RLSeq Public

    An analysis package for R-loop mapping data

    R 2

  2. RLHub RLHub Public

    ExperimentHub for accessing RLBase data

    R

  3. RLBase RLBase Public

    RLBase: A database of R-loops and R-loop-mapping experiments

    R 2

  4. RLPipes RLPipes Public

    RLPipes: A standardized R-loop-mapping pipeline.

    Python 3 1

  5. ewing_sarcoma_miller_cancers_2020 ewing_sarcoma_miller_cancers_2020 Public

    Scripts and data for reproducing analysis in Miller et al. 2020

    R 3 1

  6. correlationAnalyzeR correlationAnalyzeR Public

    Generate Novel Insights from Gene Correlation Data

    R 10 6

Repositories

Showing 10 of 22 repositories
  • RLPipes Public

    RLPipes: A standardized R-loop-mapping pipeline.

    Bishop-Laboratory/RLPipes’s past year of commit activity
    Python 3 MIT 1 13 0 Updated May 22, 2024
  • autoPLIER-analysis Public

    Analysis for the autoPLIER project

    Bishop-Laboratory/autoPLIER-analysis’s past year of commit activity
    Jupyter Notebook 2 1 15 0 Updated Feb 8, 2023
  • RLSeq Public

    An analysis package for R-loop mapping data

    Bishop-Laboratory/RLSeq’s past year of commit activity
    R 2 0 6 0 Updated Jan 11, 2023
  • RLBase-data Public

    Protocol for building/updating RLBase

    Bishop-Laboratory/RLBase-data’s past year of commit activity
    R 1 MIT 0 14 0 Updated Aug 9, 2022
  • bioconda-recipes Public Forked from bioconda/bioconda-recipes

    Conda recipes for the bioconda channel.

    Bishop-Laboratory/bioconda-recipes’s past year of commit activity
    Shell 0 MIT 3,350 0 0 Updated Aug 8, 2022
  • RA-Eval Public

    Task for evaluating skill level of Bioinformatics RA candidates.

    Bishop-Laboratory/RA-Eval’s past year of commit activity
    R 1 0 0 0 Updated Jul 28, 2022
  • RLSuite-Paper-Miller-2022 Public

    Code used to generate figures in the RLSuite paper

    Bishop-Laboratory/RLSuite-Paper-Miller-2022’s past year of commit activity
    HTML 1 MIT 0 0 0 Updated Jul 8, 2022
  • autoplieR Public

    R port of autoplier

    Bishop-Laboratory/autoplieR’s past year of commit activity
    R 0 0 1 0 Updated Jul 6, 2022
  • RLoop-QC-Meta-Analysis-Miller-2022 Public

    Generates figures for "Quality-controlled R-loop meta-analysis reveals the characteristics of R-loop consensus regions"

    Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022’s past year of commit activity
    R 0 0 20 0 Updated Jul 2, 2022
  • RLBase Public

    RLBase: A database of R-loops and R-loop-mapping experiments

    Bishop-Laboratory/RLBase’s past year of commit activity
    R 2 MIT 0 6 1 Updated Jun 28, 2022
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