Miscellaneous improvements #17
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Generated automatically by the following commands: ``` pip install --upgrade --upgrade-strategy eager -r requirements-dev.txt make lock ```
Now that I am using an Apple silicon laptop, Docker defaults to building images for ARM. This image will always need to run on an x86_64 server, so we should explicitly set the architecture for builds.
The separate `log/` directory was created before I started using top-level `data/` directories in projects, and there is no need to keep it separate. Moving it into `data/` makes the repository easier to work with, which includes allowing cleaner `git clean` output.
I removed orchestration support for Apptainer and Singularity a while ago, so there is no need to ignore their files anymore. If anyone wants to use them, they can just store them in `data/`.
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This commit contains a variety of changes I've made over the past month while working on the library.