crisprVerse / crisprDesign Star 22 Code Issues Pull requests Comprehensive design of CRISPR gRNAs for nucleases and base editors bioconductor crispr crispr-target crispr-cas9 grna grna-sequence bioconductor-package sgrna crispr-design sgrna-design grna-sequences genomics-analysis Updated Feb 10, 2025 R
crisprVerse / crisprVerse Star 13 Code Issues Pull requests Discussions Collection of R packages that work in harmony for CRISPR gRNA design crispr-analysis crispr crispr-target grna grna-sequence crispr-design grna-sequences Updated Feb 28, 2023 R
crisprVerse / crisprViz Star 7 Code Issues Pull requests Visualization of CRISPR guide RNAs (gRNAs) visualization bioconductor crispr-analysis crispr grna grna-sequence bioconductor-package sgrna crispr-design sgrna-design grna-sequences Updated Apr 2, 2024 R
crisprVerse / crisprDesignData Star 5 Code Issues Pull requests Useful human and mouse data for the crisprVerse ecosystem bioconductor crispr-analysis crispr crispr-target crispr-cas9 grna grna-sequence bioconductor-package sgrna crispr-design sgrna-design grna-sequences Updated Oct 23, 2024 R
crisprVerse / crisprBase Star 5 Code Issues Pull requests Base functions and classes for CRISPR gRNA design bioconductor crispr crispr-target crispr-cas9 grna rpackage grna-sequence bioconductor-package crispr-design grna-sequences Updated Jul 23, 2024 R
crisprVerse / crisprBowtie Star 3 Code Issues Pull requests Bowtie-based alignment of CRISPR gRNA spacer sequences bioconductor crispr-analysis crispr crispr-target bowtie aligner crispr-cas9 grna grna-sequence bioconductor-package sgrna crispr-design sgrna-design grna-sequences Updated Oct 23, 2024 R
crisprVerse / crisprScoreData Star 2 Code Issues Pull requests Pre-trained models for the crisprScore package bioconductor crispr-analysis crispr crispr-target scoring-models crispr-cas9 grna grna-sequence bioconductor-package sgrna crispr-design sgrna-design grna-sequences Updated Oct 23, 2024 R
crisprVerse / crisprBwa Star 1 Code Issues Pull requests BWA-based alignment of CRISPR gRNA spacer sequences bioconductor crispr-analysis crispr bwa crispr-target aligner crispr-cas9 grna grna-sequence bioconductor-package sgrna crispr-design sgrna-design grna-sequences Updated Oct 23, 2024 R