Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

deps(python): bump snakemake from 8.10.4 to 8.10.6 in /dependencies/python #5496

Merged

Conversation

dependabot[bot]
Copy link
Contributor

@dependabot dependabot bot commented on behalf of github Apr 8, 2024

Bumps snakemake from 8.10.4 to 8.10.6.

Release notes

Sourced from snakemake's releases.

v8.10.6

8.10.6 (2024-04-04)

Bug Fixes

  • only constrain by --max-threads if threads of job are already known (#2790) (5f28fcd)

v8.10.5

8.10.5 (2024-04-04)

Bug Fixes

  • properly delete local copies of storage files after remote jobs (#2793) (e3362b0)
  • respect APPTAINER_CACHEDIR and allow env variables in --apptainer-prefix and --conda-prefix (#2795) (b1694cd)
Changelog

Sourced from snakemake's changelog.

8.10.6 (2024-04-04)

Bug Fixes

  • only constrain by --max-threads if threads of job are already known (#2790) (5f28fcd)

8.10.5 (2024-04-04)

Bug Fixes

  • properly delete local copies of storage files after remote jobs (#2793) (e3362b0)
  • respect APPTAINER_CACHEDIR and allow env variables in --apptainer-prefix and --conda-prefix (#2795) (b1694cd)
Commits
  • b3c1dd4 chore(main): release 8.10.6 (#2796)
  • 5f28fcd fix: only constrain by --max-threads if threads of job are already known (#2790)
  • a996659 chore(main): release 8.10.5 (#2794)
  • b1694cd fix: respect APPTAINER_CACHEDIR and allow env variables in --apptainer-prefix...
  • e3362b0 fix: properly delete local copies of storage files after remote jobs (#2793)
  • See full diff in compare view

Dependabot compatibility score

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR:

  • @dependabot rebase will rebase this PR
  • @dependabot recreate will recreate this PR, overwriting any edits that have been made to it
  • @dependabot merge will merge this PR after your CI passes on it
  • @dependabot squash and merge will squash and merge this PR after your CI passes on it
  • @dependabot cancel merge will cancel a previously requested merge and block automerging
  • @dependabot reopen will reopen this PR if it is closed
  • @dependabot close will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually
  • @dependabot show <dependency name> ignore conditions will show all of the ignore conditions of the specified dependency
  • @dependabot ignore this major version will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself)
  • @dependabot ignore this minor version will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself)
  • @dependabot ignore this dependency will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)

Bumps [snakemake](/~https://github.com/snakemake/snakemake) from 8.10.4 to 8.10.6.
- [Release notes](/~https://github.com/snakemake/snakemake/releases)
- [Changelog](/~https://github.com/snakemake/snakemake/blob/main/CHANGELOG.md)
- [Commits](snakemake/snakemake@v8.10.4...v8.10.6)

---
updated-dependencies:
- dependency-name: snakemake
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot requested a review from zkoppert as a code owner April 8, 2024 13:55
@dependabot dependabot bot added the dependencies Pull requests that update a dependency file label Apr 8, 2024
@dependabot dependabot bot requested a review from Hanse00 as a code owner April 8, 2024 13:55
@dependabot dependabot bot added the python Pull requests that update Python code label Apr 8, 2024
@dependabot dependabot bot requested a review from ferrarimarco as a code owner April 8, 2024 13:55
@github-actions github-actions bot enabled auto-merge April 8, 2024 13:56
@github-actions github-actions bot added this pull request to the merge queue Apr 9, 2024
Merged via the queue into main with commit 794408d Apr 9, 2024
87 checks passed
@dependabot dependabot bot deleted the dependabot/pip/dependencies/python/snakemake-8.10.6 branch April 9, 2024 07:39
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
dependencies Pull requests that update a dependency file python Pull requests that update Python code
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant