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Make MAF output optional #30

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charles-plessy opened this issue Dec 19, 2024 · 0 comments
Closed

Make MAF output optional #30

charles-plessy opened this issue Dec 19, 2024 · 0 comments
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enhancement New feature or request
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@charles-plessy
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Description of feature

I see this in another pipeline:


            [
                path: { "${params.outdir}/QC_longreads/NanoLyse" },
                mode: params.publish_dir_mode,
                pattern: "*.log"
            ],
            [
                path: { "${params.outdir}/QC_longreads/NanoLyse" },
                mode: params.publish_dir_mode,
                pattern: "*_nanolyse.fastq.gz",
                enabled: params.save_lambdaremoved_reads
            ]

We could use the same way to make the output of maf.gz files optional (they are large).

@charles-plessy charles-plessy added the enhancement New feature or request label Dec 19, 2024
@charles-plessy charles-plessy added this to the 2.0.0 milestone Dec 19, 2024
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