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Nature Ecology & Evolution

  • L. Rocha, J., Silva, P., Santos, N., Nakamura, M., Afonso, S., Qninba, A., Boratynski, Z., Sudmant, P.H., Brito, J.C., Nielsen, R. and Godinho, R., 2023. North African fox genomes show signatures of repeated introgression and adaptation to life in deserts. Nature Ecology & Evolution, 7(8), pp.1267-1286. [GA]
    • "To jointly estimate demographic parameters and a best-fitting model we ran dadi as implemented in GADMA (genetic algorithm for demographic analyses). This software performs an automatic and unsupervised global search for a best-fitting demographic model using a genetic algorithm based on dadi parameter estimates and composite likelihood scores.
      • Noskova, E. et al. GADMA: genetic algorithm for inferring demographic history of multiple populations from allele frequency spectrum data. Gigascience 9, giaa005 (2020).