Tracker issue for pixel data encoding & decoding

[Enet4]

This will serve to keep track of issues related with the dicom-pixeldata crate and functionalities around it.

• baseline decoded pixel data abstraction
  • to_dynamic_image
  • to_ndarray
• Photometric interpretation support:
  • MONOCHROME2
  • MONOCHROME1 [pixeldata] Support for photometric interpretation MONOCHROME1 #118 Support RGB, YBR_FULL and YBR_FULL_422 PhotoMetricInterpretation #127
  • RGB [pixeldata] Support for photometric interpretation RGB #119 Support RGB, YBR_FULL and YBR_FULL_422 PhotoMetricInterpretation #127
  • YBR_FULL Support RGB, YBR_FULL and YBR_FULL_422 PhotoMetricInterpretation #127
  • YBR_FULL_422 Support RGB, YBR_FULL and YBR_FULL_422 PhotoMetricInterpretation #127
  • PALETTE COLOR (not used as much as the other ones, lesser priority). Support for photometric interpretation PALETTE COLOR #124
  • Channel-first planar configuration Account for Planar Configuration #129
  • others...
• Extend the API
  • Selective application of Modality and VOI LUT functions [pixeldata] API extension for selective application of Modality and VOI LUT functions #122 (done in [pixeldata] pixel data conversion options + LUT transformations #234)
    • to_dynamic_image only performs the Modality LUT
    • to_ndarray does no LUT processing
  • Support for multi-frame images. [pixeldata] API extension to support multi-frame images #123 Integrate with encoding TransferSyntax  #152
• Integration with the encoding crate's TransferSyntax system. [pixeldata] Integrate with encoding TransferSyntax #120 Integrate with encoding TransferSyntax  #152
• Independency from GDCM. [pixeldata] Enable building without GDCM #121 Make GDCM compilation optional #131
• Multi-frame decoding via GDCM Compatibility with multiframe pixel data via GDCM #226
• 32-bit pixel data samples Error while converting 32-bit pixel data to ndarray or image #325
• 1-bit pixel data conversion is currently not supported #348
• Modality LUT Sequence Modality LUT sequence support #242
• VOI LUT Sequence VOI LUT Sequence support #232
• Extended offset table support #439
• Inspect shared/per-frame functional groups #349
• Support Encapsulated Uncompressed Explicit VR Little Endian Support Encapsulated Uncompressed Explicit VR Little Endian #285
• Encoders need a way to specify frames and attribute changes #293
• Pixel data decoder is too eager and always returns bytes #294

Supported encapsulated pixel data transfer syntaxes

(incomplete table, will expand later)

Transfer Syntax UID	name	decoding support	encoding support
1.2.840.10008.1.2.4.50	JPEG Baseline (Process 1)	native (+ via GDCM)	yes (#303)
1.2.840.10008.1.2.4.51	JPEG Extended (Process 2 & 4)	only via GDCM	no (#286)
1.2.840.10008.1.2.4.70	JPEG Lossless, Non-Hierarchical, First-Order Prediction	limited (+ via GDCM)	no (#286)
1.2.840.10008.1.2.4.80	JPEG-LS Lossless Image Compression	yes, via CharLS (#534) (+ GDCM)	yes (#573)
1.2.840.10008.1.2.4.81	JPEG-LS Lossy (Near-Lossless)	yes, via CharLS (#534) (+ GDCM)	yes (#573)
1.2.840.10008.1.2.4.90	JPEG 2000 Image Compression (Lossless Only)	yes, via OpenJPEG (#425 ) (+ via GDCM)	no
1.2.840.10008.1.2.4.91	JPEG 2000 Image Compression	yes, via OpenJPEG (#425) (+ via GDCM)	no
1.2.840.10008.1.2.4.92	JPEG 2000 Part 2 Multi-component Image Compression (Lossless Only)	yes, via OpenJPEG (#425) (+ via GDCM)	no
1.2.840.10008.1.2.4.93	JPEG 2000 Part 2 Multi-component Image Compression	yes, via OpenJPEG (#425) (+ via GDCM)	no
1.2.840.10008.1.2.4.201	High-Throughput JPEG 2000 Image Compression (Lossless Only)	yes, via OpenJPEG (#499)	no
1.2.840.10008.1.2.4.202	High-Throughput JPEG 2000 with RPCL Options Image Compression (Lossless Only)	yes, via OpenJPEG (#499)	no
1.2.840.10008.1.2.4.203	High-Throughput JPEG 2000 Image Compression	yes, via OpenJPEG (#499)	no
1.2.840.10008.1.2.4.110	JPEG XL Lossless	yes, via jxl-oxide (#571)	yes (#571)
1.2.840.10008.1.2.4.111	JPEG XL Recompression	yes, via jxl-oxide (#571)	no
1.2.840.10008.1.2.4.112	JPEG XL	yes, via jxl-oxide (#571)	yes (#571)
1.2.840.10008.1.2.5	RLE Lossless	native + via GDCM	no (#287)