CE-ABC is a code to simulate the epidemic outbreaks with mechanistic models through a cross-entropy approximate Bayesian framework.
A nlogistic-sigmoid playground for modelling the COVID-19 pandemic growth
a travel-network-based susceptible-exposed-infectious-removed (SEIR) mathematical compartmental model ODE system.
This is a very simple MATLAB live script that does basic interpolation on the COVID-19 data available for Italy
This repository contains all the scripts related to the project "Epidemiology with MATLAB"
Matlab code for the simulation of a zombie outbreak using a compartmental model
epidWaves is a Matlab/Python package to fit multi-wave statistical models to the complex epidemic data.
GNU Octave SIR model simulation for Spread of Disease
D-FENSE is a repository for dengue data in Brazil, enabling predictive modeling, visualization, and public health support.
The following files are the codes used in the paper Transmission dynamics and baseline epidemiological parameter estimates of Coronavirus disease 2019 (COVID-19) pre-vaccination: Davao City, Philippines
A Random Forest model for predicting incidence of potato blackleg at the landscape-scale.
Analysis and implementation of the simple SIR model, the SIR model with vaccination, and the SIR model with vaccination and immunity terms.
Visualizing the spread of COVID-19 cases in Indonesia through the SIRD Model using MATLAB
Construction d’un solveur d’EDO sur MATLAB et application à un simulateur de progression d’épidémie.
A collection of MATLAB scripts used for a research project at the Mathematical and Theoretical Biology Institute (MTBI) 2011 Summer program.
This repository contains codes developed in 2022 to simulate the proposed Mobile Human Ad Hoc Network model to simulate the infectious disease spread based on airborne transmission.
🔬 Code for my graduation project
Final project for Pf. Hyman's epidemic modeling course Fall 2020
Undergraduate Thesis: ·"Numerical simulation of SEIQR model and its application to the COVID-19 pandemic."
We address the calibration of SEIR-like epidemiological models from daily reports of COVID-19 infections in New York City, during the period 01-Mar-2020 to 22-Aug-2020. Our models account for different types of disease severity, age range, sex and spatial distribution. The manuscript related to such simulations can be found in https://arxiv.org/…
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