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DESCRIPTION
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Package: fastaR
Type: Package
Title: Fasta Sequence Manipulation
Version: 0.1.0
Author: Pooja Sethiya
Authors@R:
person(given = "Pooja",
family = "Sethiya",
role = c("aut", "cre"),
email = "poojasethiya24@gmail.com",
comment = c(ORCID = "YOUR-ORCID-ID"))
Maintainer: Pooja Sethiya <poojasethiya24@gmail.com>
Description: Allows biologists to easily manipulate fasta sequences like those of proteins or genome to perform specific analysis. This broadly have applications like subsetting set of sequences from big fasta file or summarizing sequences in given fasta file based on length, %GC etc.
License: MIT
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.0
Imports:
magrittr(>= 1.5),
rlang(>= 0.4.2),
png (>= 0.1-7),
rtracklayer (>= 1.42.2),
GenomicFeatures (>= 1.38.0),
broom (>= 0.5.2),
dplyr (>= 0.8.3),
purrr (>= 0.3.2),
knitr (>= 1.25),
tidyr (>= 1.0.0),
ggplot2 (>= 3.2.1),
stringr (>= 1.4.0),
usethis (>= 1.5.0),
kableExtra (>= 1.1.0),
readr(>= 1.3.1),
Biostrings (>= 2.54.0),
Rsamtools (>= 2.2.1),
gridExtra (>= 2.3),
BSgenome (>= 1.54.0),
IRanges (>= 2.20.2),
GenomicRanges (>= 1.38.0)
VignetteBuilder: knitr
links:
BugReports: /~https://github.com/sethiyap/fastaR/issues
URL: /~https://github.com/sethiyap/fastaR