DESCRIPTION

Package: hydroState
Title: Hidden Markov Modelling of hydrological state change
Version: 0.1.0.2
Authors@R: c(
    person("Tim", "Peterson", email = "tim.peterson@monash.edu", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-1885-0826"))) 
Maintainer: Tim Peterson <tim.peterson@monash.edu>
Depends: R (>= 3.4.2)
Description: HydroState idenifies regime changes in streamflow runoff nor explained by varioations in precipitation. The package allows a flexible set of Hidden Markov Models of annual, seasonal or monthly streamflow runoff to be built that includes precipitation as a predictor of runoff. Suites of models can be build for a single site, ranging from from one to three states can be build and each with differing combinations of error models and auto-correlation terms, allowing the most parsimineous model (by AIC) to easily be idenified. The entire package is written in R S4 object oriented code. See Peterson TJ, Saft M, Peel MC & John A (2021), Watersheds may not recover from drought, Science, DOI: 10.1126/science.abd5085
Imports: DEoptim, sn, truncnorm, diagram
BugReports: /~https://github.com/peterson-tim-j/HydroState/issues
URL: /~https://github.com/peterson-tim-j/HydroState
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.0
ByteCompile: true
Collate: 
    'abstracts.R'
    'parameters.R'
    'Qhat.boxcox.R'
    'Qhat.burbidge.R'
    'Qhat.log.R'
    'Qhat.none.R'
    'QhatModel.homo.normal.linear.R'
    'QhatModel.homo.normal.linear.AR1.R'
    'QhatModel.homo.gamma.linear.R'
    'QhatModel.homo.gamma.linear.AR1.R'
    'QhatModel.homo.normal.linear.AR2.R'
    'QhatModel.homo.gamma.linear.AR2.R'
    'QhatModel.homo.normal.linear.AR3.R'
    'QhatModel.homo.gamma.linear.AR3.R'
    'QhatModel.homo.skewedNormal.linear.R'
    'QhatModel.homo.skewedNormal.linear.AR1.R'
    'QhatModel.homo.skewedNormal.linear.AR2.R'
    'QhatModel.homo.skewedNormal.linear.AR3.R'
    'QhatModel.subAnnual.homo.gamma.linear.R'
    'QhatModel.subAnnual.homo.gamma.linear.AR1.R'
    'QhatModel.subAnnual.homo.gamma.linear.AR2.R'
    'QhatModel.subAnnual.homo.gamma.linear.AR3.R'
    'markov.annualHomogeneous.R'
    'hydroState.R'
    'hydroState.allModels.R'
    'hydroState.subAnnual.allModels.R'
    'markov.annualHomogeneous.flickering.R'