diff --git a/.cruft.json b/.cruft.json
index e5e0ea2..0d570a9 100644
--- a/.cruft.json
+++ b/.cruft.json
@@ -1,23 +1,23 @@
 {
-  "template": "/~https://github.com/scverse/cookiecutter-scverse",
-  "commit": "57f6267716826dad73baba46dc3c00fe7262c459",
-  "context": {
-    "cookiecutter": {
-      "project_name": "infercnvpy",
-      "package_name": "infercnvpy",
-      "project_description": "Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy. ",
-      "author_full_name": "Gregor Sturm",
-      "author_email": "mail@gregor-sturm.de",
-      "github_user": "grst",
-      "project_repo": "/~https://github.com/icbi-lab/infercnvpy",
-      "license": "BSD 3-Clause License",
-      "_copy_without_render": [
-        ".github/workflows/**.yaml",
-        "docs/_templates/autosummary/**.rst"
-      ],
-      "_template": "/~https://github.com/scverse/cookiecutter-scverse"
-    }
-  },
-  "directory": null,
-  "checkout": "v0.2.0"
+    "template": "/~https://github.com/scverse/cookiecutter-scverse",
+    "commit": "57f6267716826dad73baba46dc3c00fe7262c459",
+    "context": {
+        "cookiecutter": {
+            "project_name": "infercnvpy",
+            "package_name": "infercnvpy",
+            "project_description": "Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy. ",
+            "author_full_name": "Gregor Sturm",
+            "author_email": "mail@gregor-sturm.de",
+            "github_user": "grst",
+            "project_repo": "/~https://github.com/icbi-lab/infercnvpy",
+            "license": "BSD 3-Clause License",
+            "_copy_without_render": [
+                ".github/workflows/**.yaml",
+                "docs/_templates/autosummary/**.rst"
+            ],
+            "_template": "/~https://github.com/scverse/cookiecutter-scverse"
+        }
+    },
+    "directory": null,
+    "checkout": "v0.2.0"
 }
diff --git a/docs/conf.py.rej b/docs/conf.py.rej
index 3644484..89fb237 100644
--- a/docs/conf.py.rej
+++ b/docs/conf.py.rej
@@ -1,7 +1,7 @@
 diff a/docs/conf.py b/docs/conf.py	(rejected hunks)
 @@ -87,6 +87,7 @@ source_suffix = {
  }
- 
+
  intersphinx_mapping = {
 +    "python": ("https://docs.python.org/3", None),
      "anndata": ("https://anndata.readthedocs.io/en/stable/", None),
diff --git a/pyproject.toml.rej b/pyproject.toml.rej
index a4f376b..2a7dee4 100644
--- a/pyproject.toml.rej
+++ b/pyproject.toml.rej
@@ -2,7 +2,7 @@ diff a/pyproject.toml b/pyproject.toml	(rejected hunks)
 @@ -2,7 +2,6 @@
  build-backend = "hatchling.build"
  requires = ["hatchling"]
- 
+
 -
  [project]
  name = "infercnvpy"
@@ -19,7 +19,7 @@ diff a/pyproject.toml b/pyproject.toml	(rejected hunks)
 @@ -61,32 +60,59 @@ addopts = [
      "--import-mode=importlib",  # allow using test files with same name
  ]
- 
+
 -[tool.isort]
 -include_trailing_comma = true
 -multi_line_output = 3
@@ -97,6 +97,6 @@ diff a/pyproject.toml b/pyproject.toml	(rejected hunks)
 +"docs/*" = ["I"]
 +"tests/*" = ["D"]
 +"*/__init__.py" = ["F401"]
- 
+
  [tool.jupytext]
  formats = "ipynb,md"