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Jana Ebler edited this page Aug 3, 2023 · 7 revisions

This page will explain in detail how to run PanGenie on different datasets.

Required input data

TODO

Running PanGenie on HPRC data

TODO

Running PanGenie on HGSVC data

TODO

Creating PanGenie input VCFs from haplotype-resolved assemblies

TODO

Creating PanGenie input VCFs from existing callsets

TODO