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Scoring/ranking problem in basicmhc1 and tepitope #11

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francescopatane96 opened this issue Apr 28, 2023 · 0 comments
Open

Scoring/ranking problem in basicmhc1 and tepitope #11

francescopatane96 opened this issue Apr 28, 2023 · 0 comments

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@francescopatane96
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Hi! I’m using tepitope and basicmhc1 models and i noticed the cutoff method in tepitope work well but not in basicmhc1. In particular, with basicmhc1 epitopes with rank 1 are the worriest ones and have low score. Better epitopes are those with higher ranks. When using cutoff=0,95, best epitopes are removed. How this issue can be fix? Thank you
Francesco
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