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CMakeLists.txt
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cmake_minimum_required (VERSION 3.18)
project (HDF5 C)
if (POLICY CMP0074)
# find_package() uses <PackageName>_ROOT variables.
cmake_policy (SET CMP0074 NEW)
endif ()
if (POLICY CMP0083)
# To control generation of Position Independent Executable (PIE) or not,
# some flags are required at link time.
cmake_policy (SET CMP0083 NEW)
endif ()
# Avoid warning about DOWNLOAD_EXTRACT_TIMESTAMP in CMake 3.24:
if (CMAKE_VERSION VERSION_GREATER_EQUAL "3.24.0")
cmake_policy(SET CMP0135 NEW)
endif()
#-----------------------------------------------------------------------------
# Instructions for use : Normal Build
#
# For standard build of HDF5 libraries,tests and tools.
# Run cmake using the HDF5 source tree to generate a build tree.
# Enable/Disable options according to requirements and
# set CMAKE_INSTALL_PREFIX to the required install path.
# Make install can be used to install all components for system-wide use.
#
if (CMAKE_CURRENT_SOURCE_DIR STREQUAL CMAKE_CURRENT_BINARY_DIR)
message (FATAL_ERROR "\nERROR! ${PROJECT_NAME} DOES NOT SUPPORT IN SOURCE BUILDS!\n"
"CMAKE_CURRENT_SOURCE_DIR=${CMAKE_CURRENT_SOURCE_DIR}"
" == CMAKE_CURRENT_BINARY_DIR=${CMAKE_CURRENT_BINARY_DIR}\n"
"NEXT STEPS:\n"
"(1) Delete the CMakeCache.txt file and the CMakeFiles/ directory\n"
" under the source directory for ${PROJECT_NAME}, otherwise you\n"
" will not be able to configure ${PROJECT_NAME} correctly!\n"
" * For example, on linux machines do:\n"
" $ rm -r CMakeCache.txt CMakeFiles/\n"
"(2) Create a different directory and configure ${PROJECT_NAME} in that directory.\n"
" * For example, on linux machines do:\n"
" $ mkdir MY_BUILD\n"
" $ cd MY_BUILD\n"
" $ cmake [OPTIONS] ..\n"
)
endif ()
#-----------------------------------------------------------------------------
# Instructions for use : Sub-Project Build
#
# To include HDF5 as a sub-project within another project.
# Set HDF5_EXTERNALLY_CONFIGURED to 1 in the parent project and
# supply values for the following variables...
#
# HDF5_EXPORTED_TARGETS :
# Set this to the name of the targets variable which controls exports
# If unset (because parent project does not support/use the
# install (EXPORT target...) syntax), then targets are not configured
# for export during install.
#
# HDF5_LIB_DEPENDENCIES :
# If the build of HDF5 libs is being customized, then rules for the
# dependencies of the HDF5 libs may be 'incomplete', add additional
# dependencies to this variable so that external projects pick them up
#
#option (HDF5_EXTERNAL_LIB_PREFIX "Use prefix for custom library naming." "")
set (HDF5_EXTERNAL_LIB_PREFIX "" CACHE STRING "Use prefix for custom library naming.")
mark_as_advanced (HDF5_EXTERNAL_LIB_PREFIX)
# HDF5_EXTERNAL_LIB_PREFIX :
# If the parent project needs to install hdf libraries, but avoid
# name conflicts with system versions, then a prefix may be added
# to ensure that the correct versions configured are used.
set (HDF5_LIB_INFIX "" CACHE STRING "Use infix for custom library naming.")
mark_as_advanced (HDF5_LIB_INFIX)
# HDF5_LIB_INFIX :
# This infix is added to all library names after 'hdf5'.
# e.g. the infix '_openmpi' results in the library name 'libhdf5_openmpi.so'
# This name is used in packages on debian based systems.
# (see https://packages.debian.org/jessie/amd64/libhdf5-openmpi-8/filelist)
#
# HDF5_INSTALL_BIN_DIR, HDF5_INSTALL_LIB_DIR, HDF5_INSTALL_INCLUDE_DIR, HDF5_INSTALL_DATA_DIR :
# Customize the 'bin', 'lib', 'include', and 'share' installation directories.
#
# HDF5_INSTALL_NO_DEVELOPMENT :
# Set to true to skip installation of headers and CMake package files.
#
# Consider this example from the ParaView project, it builds its own zlib
# library and tells HDF5 to add it as a dependency - this ensures that
# any project making use of this build of HDF5 will use the correct zlib
#
# # Tell hdf5 that we are manually overriding certain settings
# set (HDF5_EXTERNALLY_CONFIGURED 1)
# # Avoid duplicating names of installed libraries
# set (HDF5_EXTERNAL_LIB_PREFIX "vtk")
# # Export configuration to this export variable
# set (HDF5_EXPORTED_TARGETS "paraview-targets")
#
# # Setup all necessary overrides for zlib so that HDF5 uses our
# # internally compiled zlib rather than any other version
# if (HDF5_ENABLE_Z_LIB_SUPPORT)
# # We must tell the main HDF5 library that it depends on our zlib
# set (HDF5_LIB_DEPENDENCIES vtkzlib)
# # Override the zlib header file
# if (VTK_USE_SYSTEM_ZLIB)
# set (H5_ZLIB_HEADER "zlib.h")
# else ()
# set (H5_ZLIB_HEADER "vtk_zlib.h")
# # Set vars that FindZlib would have set if used in sub project
# set (ZLIB_INCLUDE_DIRS "${VTK_ZLIB_INCLUDE_DIRS}")
# set (ZLIB_LIBRARIES vtkzlib)
# endif ()
# endif ()
#
# # Add the sub project
# add_subdirectory (Utilities/hdf5-1.8)
#-----------------------------------------------------------------------------
string (TIMESTAMP CONFIG_DATE "%Y-%m-%d")
#-----------------------------------------------------------------------------
# Allow Visual Studio solution directories
#-----------------------------------------------------------------------------
# Provide a way for Visual Studio Express users to turn OFF the new FOLDER
# organization feature. Default to ON for non-Express users. Express users must
# explicitly turn off this option to build HDF5 in the Express IDE...
#
option (HDF5_USE_FOLDERS "Enable folder grouping of projects in IDEs." ON)
mark_as_advanced (HDF5_USE_FOLDERS)
if (HDF5_USE_FOLDERS)
set_property (GLOBAL PROPERTY USE_FOLDERS ON)
endif ()
option (HDF5_NO_PACKAGES "CPACK - Disable packaging" OFF)
mark_as_advanced (HDF5_NO_PACKAGES)
option (ALLOW_UNSUPPORTED "Allow unsupported combinations of configure options" OFF)
mark_as_advanced (ALLOW_UNSUPPORTED)
#-----------------------------------------------------------------------------
# Set the core names of all the libraries
#-----------------------------------------------------------------------------
set (HDF5_LIB_CORENAME "hdf5${HDF5_LIB_INFIX}")
set (HDF5_TEST_LIB_CORENAME "hdf5${HDF5_LIB_INFIX}_test")
set (HDF5_CPP_LIB_CORENAME "hdf5${HDF5_LIB_INFIX}_cpp")
set (HDF5_HL_LIB_CORENAME "hdf5${HDF5_LIB_INFIX}_hl")
set (HDF5_HL_CPP_LIB_CORENAME "hdf5${HDF5_LIB_INFIX}_hl_cpp")
set (HDF5_TOOLS_LIB_CORENAME "hdf5${HDF5_LIB_INFIX}_tools")
set (HDF5_UTILS_LIB_CORENAME "hdf5${HDF5_LIB_INFIX}_utils")
set (HDF5_F90_LIB_CORENAME "hdf5${HDF5_LIB_INFIX}_fortran")
set (HDF5_F90_C_LIB_CORENAME "hdf5${HDF5_LIB_INFIX}_f90cstub")
set (HDF5_F90_TEST_LIB_CORENAME "hdf5${HDF5_LIB_INFIX}_test_fortran")
set (HDF5_F90_C_TEST_LIB_CORENAME "hdf5${HDF5_LIB_INFIX}_test_f90cstub")
set (HDF5_HL_F90_LIB_CORENAME "hdf5${HDF5_LIB_INFIX}_hl_fortran")
set (HDF5_HL_F90_C_LIB_CORENAME "hdf5${HDF5_LIB_INFIX}_hl_f90cstub")
set (HDF5_JAVA_JNI_LIB_CORENAME "hdf5${HDF5_LIB_INFIX}_java")
set (HDF5_JAVA_HDF5_LIB_CORENAME "jarhdf5")
set (HDF5_JAVA_TEST_LIB_CORENAME "jartest5")
#-----------------------------------------------------------------------------
# Set the true names of all the libraries if customized by external project
#-----------------------------------------------------------------------------
set (HDF5_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_LIB_CORENAME}")
set (HDF5_TEST_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_TEST_LIB_CORENAME}")
set (HDF5_CPP_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_CPP_LIB_CORENAME}")
set (HDF5_HL_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_HL_LIB_CORENAME}")
set (HDF5_HL_CPP_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_HL_CPP_LIB_CORENAME}")
set (HDF5_TOOLS_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_TOOLS_LIB_CORENAME}")
set (HDF5_UTILS_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_UTILS_LIB_CORENAME}")
set (HDF5_F90_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_F90_LIB_CORENAME}")
set (HDF5_F90_C_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_F90_C_LIB_CORENAME}")
set (HDF5_F90_TEST_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_F90_TEST_LIB_CORENAME}")
set (HDF5_F90_C_TEST_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_F90_C_TEST_LIB_CORENAME}")
set (HDF5_HL_F90_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_HL_F90_LIB_CORENAME}")
set (HDF5_HL_F90_C_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_HL_F90_C_LIB_CORENAME}")
set (HDF5_JAVA_JNI_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_JAVA_JNI_LIB_CORENAME}")
set (HDF5_JAVA_HDF5_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_JAVA_HDF5_LIB_CORENAME}")
set (HDF5_JAVA_TEST_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_JAVA_TEST_LIB_CORENAME}")
#-----------------------------------------------------------------------------
# Set the target names of all the libraries
#-----------------------------------------------------------------------------
set (HDF5_LIB_TARGET "${HDF5_LIB_CORENAME}-static")
set (HDF5_TEST_LIB_TARGET "${HDF5_TEST_LIB_CORENAME}-static")
set (HDF5_CPP_LIB_TARGET "${HDF5_CPP_LIB_CORENAME}-static")
set (HDF5_HL_LIB_TARGET "${HDF5_HL_LIB_CORENAME}-static")
set (HDF5_HL_CPP_LIB_TARGET "${HDF5_HL_CPP_LIB_CORENAME}-static")
set (HDF5_TOOLS_LIB_TARGET "${HDF5_TOOLS_LIB_CORENAME}-static")
set (HDF5_UTILS_LIB_TARGET "${HDF5_UTILS_LIB_CORENAME}-static")
set (HDF5_F90_LIB_TARGET "${HDF5_F90_LIB_CORENAME}-static")
set (HDF5_F90_C_LIB_TARGET "${HDF5_F90_C_LIB_CORENAME}-static")
set (HDF5_F90_TEST_LIB_TARGET "${HDF5_F90_TEST_LIB_CORENAME}-static")
set (HDF5_F90_C_TEST_LIB_TARGET "${HDF5_F90_C_TEST_LIB_CORENAME}-static")
set (HDF5_HL_F90_LIB_TARGET "${HDF5_HL_F90_LIB_CORENAME}-static")
set (HDF5_HL_F90_C_LIB_TARGET "${HDF5_HL_F90_C_LIB_CORENAME}-static")
set (HDF5_JAVA_JNI_LIB_TARGET "${HDF5_JAVA_JNI_LIB_CORENAME}")
set (HDF5_JAVA_HDF5_LIB_TARGET "${HDF5_JAVA_HDF5_LIB_CORENAME}")
set (HDF5_JAVA_TEST_LIB_TARGET "${HDF5_JAVA_TEST_LIB_CORENAME}")
set (HDF5_LIBSH_TARGET "${HDF5_LIB_CORENAME}-shared")
set (HDF5_TEST_LIBSH_TARGET "${HDF5_TEST_LIB_CORENAME}-shared")
set (HDF5_CPP_LIBSH_TARGET "${HDF5_CPP_LIB_CORENAME}-shared")
set (HDF5_HL_LIBSH_TARGET "${HDF5_HL_LIB_CORENAME}-shared")
set (HDF5_HL_CPP_LIBSH_TARGET "${HDF5_HL_CPP_LIB_CORENAME}-shared")
set (HDF5_TOOLS_LIBSH_TARGET "${HDF5_TOOLS_LIB_CORENAME}-shared")
set (HDF5_UTILS_LIBSH_TARGET "${HDF5_UTILS_LIB_CORENAME}-shared")
set (HDF5_F90_LIBSH_TARGET "${HDF5_F90_LIB_CORENAME}-shared")
set (HDF5_F90_C_LIBSH_TARGET "${HDF5_F90_C_LIB_CORENAME}-shared")
set (HDF5_F90_TEST_LIBSH_TARGET "${HDF5_F90_TEST_LIB_CORENAME}-shared")
set (HDF5_F90_C_TEST_LIBSH_TARGET "${HDF5_F90_C_TEST_LIB_CORENAME}-shared")
set (HDF5_HL_F90_LIBSH_TARGET "${HDF5_HL_F90_LIB_CORENAME}-shared")
set (HDF5_HL_F90_C_LIBSH_TARGET "${HDF5_HL_F90_C_LIB_CORENAME}-shared")
#-----------------------------------------------------------------------------
# Define some CMake variables for use later in the project
#-----------------------------------------------------------------------------
set (HDF_CONFIG_DIR ${HDF5_SOURCE_DIR}/config)
set (HDF_RESOURCES_DIR ${HDF5_SOURCE_DIR}/config/cmake)
set (HDF5_SRC_DIR ${HDF5_SOURCE_DIR}/src)
set (HDF5_TEST_SRC_DIR ${HDF5_SOURCE_DIR}/test)
set (HDF5_TEST_PAR_DIR ${HDF5_SOURCE_DIR}/testpar)
set (HDF5_TEST_API_SRC_DIR ${HDF5_SOURCE_DIR}/test/API)
set (HDF5_TEST_API_PAR_SRC_DIR ${HDF5_SOURCE_DIR}/testpar/API)
set (HDF5_CPP_SRC_DIR ${HDF5_SOURCE_DIR}/c++)
set (HDF5_CPP_TST_DIR ${HDF5_SOURCE_DIR}/c++/test)
set (HDF5_HL_SRC_DIR ${HDF5_SOURCE_DIR}/hl)
set (HDF5_HL_CPP_SRC_DIR ${HDF5_SOURCE_DIR}/hl/c++)
set (HDF5_HL_TOOLS_DIR ${HDF5_SOURCE_DIR}/hl/tools)
set (HDF5_TOOLS_DIR ${HDF5_SOURCE_DIR}/tools)
set (HDF5_TOOLS_SRC_DIR ${HDF5_SOURCE_DIR}/tools/src)
set (HDF5_TOOLS_TST_DIR ${HDF5_SOURCE_DIR}/tools/test)
set (HDF5_PERFORM_SRC_DIR ${HDF5_SOURCE_DIR}/tools/src/perform)
set (HDF5_UTILS_DIR ${HDF5_SOURCE_DIR}/utils)
set (HDF5_F90_SRC_DIR ${HDF5_SOURCE_DIR}/fortran)
set (HDF5_JAVA_JNI_SRC_DIR ${HDF5_SOURCE_DIR}/java/src/jni)
set (HDF5_JAVA_HDF5_SRC_DIR ${HDF5_SOURCE_DIR}/java/src/hdf)
set (HDF5_JAVA_TEST_SRC_DIR ${HDF5_SOURCE_DIR}/java/test)
set (HDF5_JAVA_LIB_DIR ${HDF5_SOURCE_DIR}/java/lib)
set (HDF5_JAVA_LOGGING_JAR ${HDF5_SOURCE_DIR}/java/lib/slf4j-api-2.0.6.jar)
set (HDF5_JAVA_LOGGING_NOP_JAR ${HDF5_SOURCE_DIR}/java/lib/ext/slf4j-nop-2.0.6.jar)
set (HDF5_JAVA_LOGGING_SIMPLE_JAR ${HDF5_SOURCE_DIR}/java/lib/ext/slf4j-simple-2.0.6.jar)
set (HDF5_DOXYGEN_DIR ${HDF5_SOURCE_DIR}/doxygen)
set (HDF5_SRC_INCLUDE_DIRS ${HDF5_SRC_DIR})
#-----------------------------------------------------------------------------
# parse the full version number from H5public.h and include in H5_VERS_INFO
#-----------------------------------------------------------------------------
file (READ ${HDF5_SRC_DIR}/H5public.h _h5public_h_contents)
string (REGEX REPLACE ".*#define[ \t]+H5_VERS_MAJOR[ \t]+([0-9]*).*$"
"\\1" H5_VERS_MAJOR ${_h5public_h_contents})
string (REGEX REPLACE ".*#define[ \t]+H5_VERS_MINOR[ \t]+([0-9]*).*$"
"\\1" H5_VERS_MINOR ${_h5public_h_contents})
string (REGEX REPLACE ".*#define[ \t]+H5_VERS_RELEASE[ \t]+([0-9]*).*$"
"\\1" H5_VERS_RELEASE ${_h5public_h_contents})
string (REGEX REPLACE ".*#define[ \t]+H5_VERS_SUBRELEASE[ \t]+\"([0-9A-Za-z._-]*)\".*$"
"\\1" H5_VERS_SUBRELEASE ${_h5public_h_contents})
message (TRACE "VERSION: ${H5_VERS_MAJOR}.${H5_VERS_MINOR}.${H5_VERS_RELEASE}-${H5_VERS_SUBRELEASE}")
#-----------------------------------------------------------------------------
# parse the full soversion number from config/lt_vers.am and include in H5_SOVERS_INFO
#-----------------------------------------------------------------------------
file (READ ${HDF5_SOURCE_DIR}/config/lt_vers.am _lt_vers_am_contents)
string (REGEX REPLACE ".*LT_VERS_INTERFACE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_LIB_SOVERS_INTERFACE ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_VERS_REVISION[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_LIB_SOVERS_MINOR ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_VERS_AGE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_LIB_SOVERS_RELEASE ${_lt_vers_am_contents})
math (EXPR H5_LIB_SOVERS_MAJOR ${H5_LIB_SOVERS_INTERFACE}-${H5_LIB_SOVERS_RELEASE})
message (VERBOSE "SOVERSION: ${H5_LIB_SOVERS_MAJOR}.${H5_LIB_SOVERS_RELEASE}.${H5_LIB_SOVERS_MINOR}")
string (REGEX MATCH ".*LT_TOOLS_VERS_INTERFACE[ \t]+=[ \t]+([0-9]*).*$" H5_TOOLS_SOVERS_EXISTS ${_lt_vers_am_contents})
if (H5_TOOLS_SOVERS_EXISTS)
string (REGEX REPLACE ".*LT_TOOLS_VERS_INTERFACE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_TOOLS_SOVERS_INTERFACE ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_TOOLS_VERS_REVISION[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_TOOLS_SOVERS_MINOR ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_TOOLS_VERS_AGE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_TOOLS_SOVERS_RELEASE ${_lt_vers_am_contents})
math (EXPR H5_TOOLS_SOVERS_MAJOR ${H5_TOOLS_SOVERS_INTERFACE}-${H5_TOOLS_SOVERS_RELEASE})
message (VERBOSE "SOVERSION_TOOLS: ${H5_TOOLS_SOVERS_MAJOR}.${H5_TOOLS_SOVERS_RELEASE}.${H5_TOOLS_SOVERS_MINOR}")
endif ()
string (REGEX MATCH ".*LT_CXX_VERS_INTERFACE[ \t]+=[ \t]+([0-9]*).*$" H5_CXX_SOVERS_EXISTS ${_lt_vers_am_contents})
if (H5_CXX_SOVERS_EXISTS)
string (REGEX REPLACE ".*LT_CXX_VERS_INTERFACE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_CXX_SOVERS_INTERFACE ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_CXX_VERS_REVISION[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_CXX_SOVERS_MINOR ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_CXX_VERS_AGE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_CXX_SOVERS_RELEASE ${_lt_vers_am_contents})
math (EXPR H5_CXX_SOVERS_MAJOR ${H5_CXX_SOVERS_INTERFACE}-${H5_CXX_SOVERS_RELEASE})
message (VERBOSE "SOVERSION_CXX: ${H5_CXX_SOVERS_MAJOR}.${H5_CXX_SOVERS_RELEASE}.${H5_CXX_SOVERS_MINOR}")
endif ()
string (REGEX MATCH ".*LT_F_VERS_INTERFACE[ \t]+=[ \t]+([0-9]*).*$" H5_F_SOVERS_EXISTS ${_lt_vers_am_contents})
if (H5_F_SOVERS_EXISTS)
string (REGEX REPLACE ".*LT_F_VERS_INTERFACE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_F_SOVERS_INTERFACE ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_F_VERS_REVISION[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_F_SOVERS_MINOR ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_F_VERS_AGE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_F_SOVERS_RELEASE ${_lt_vers_am_contents})
math (EXPR H5_F_SOVERS_MAJOR ${H5_F_SOVERS_INTERFACE}-${H5_F_SOVERS_RELEASE})
message (VERBOSE "SOVERSION_F: ${H5_F_SOVERS_MAJOR}.${H5_F_SOVERS_RELEASE}.${H5_F_SOVERS_MINOR}")
endif ()
string (REGEX MATCH ".*LT_HL_VERS_INTERFACE[ \t]+=[ \t]+([0-9]*).*$" H5_HL_SOVERS_EXISTS ${_lt_vers_am_contents})
if (H5_HL_SOVERS_EXISTS)
string (REGEX REPLACE ".*LT_HL_VERS_INTERFACE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_HL_SOVERS_INTERFACE ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_HL_VERS_REVISION[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_HL_SOVERS_MINOR ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_HL_VERS_AGE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_HL_SOVERS_RELEASE ${_lt_vers_am_contents})
math (EXPR H5_HL_SOVERS_MAJOR ${H5_HL_SOVERS_INTERFACE}-${H5_HL_SOVERS_RELEASE})
message (VERBOSE "SOVERSION_HL: ${H5_HL_SOVERS_MAJOR}.${H5_HL_SOVERS_RELEASE}.${H5_HL_SOVERS_MINOR}")
endif ()
string (REGEX MATCH ".*LT_HL_CXX_VERS_INTERFACE[ \t]+=[ \t]+([0-9]*).*$" H5_HL_CXX_SOVERS_EXISTS ${_lt_vers_am_contents})
if (H5_HL_CXX_SOVERS_EXISTS)
string (REGEX REPLACE ".*LT_HL_CXX_VERS_INTERFACE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_HL_CXX_SOVERS_INTERFACE ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_HL_CXX_VERS_REVISION[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_HL_CXX_SOVERS_MINOR ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_HL_CXX_VERS_AGE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_HL_CXX_SOVERS_RELEASE ${_lt_vers_am_contents})
math (EXPR H5_HL_CXX_SOVERS_MAJOR ${H5_HL_CXX_SOVERS_INTERFACE}-${H5_HL_CXX_SOVERS_RELEASE})
message (VERBOSE "SOVERSION_HL_CXX: ${H5_HL_CXX_SOVERS_MAJOR}.${H5_HL_CXX_SOVERS_RELEASE}.${H5_HL_CXX_SOVERS_MINOR}")
endif ()
string (REGEX MATCH ".*LT_HL_F_VERS_INTERFACE[ \t]+=[ \t]+([0-9]*).*$" H5_HL_F_SOVERS_EXISTS ${_lt_vers_am_contents})
if (H5_HL_F_SOVERS_EXISTS)
string (REGEX REPLACE ".*LT_HL_F_VERS_INTERFACE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_HL_F_SOVERS_INTERFACE ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_HL_F_VERS_REVISION[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_HL_F_SOVERS_MINOR ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_HL_F_VERS_AGE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_HL_F_SOVERS_RELEASE ${_lt_vers_am_contents})
math (EXPR H5_HL_F_SOVERS_MAJOR ${H5_HL_F_SOVERS_INTERFACE}-${H5_HL_F_SOVERS_RELEASE})
message (VERBOSE "SOVERSION_HL_F: ${H5_HL_F_SOVERS_MAJOR}.${H5_HL_F_SOVERS_RELEASE}.${H5_HL_F_SOVERS_MINOR}")
endif ()
string (REGEX MATCH ".*LT_JAVA_VERS_INTERFACE[ \t]+=[ \t]+([0-9]*).*$" H5_JAVA_SOVERS_EXISTS ${_lt_vers_am_contents})
if(H5_JAVA_SOVERS_EXISTS)
string (REGEX REPLACE ".*LT_JAVA_VERS_INTERFACE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_JAVA_SOVERS_INTERFACE ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_JAVA_VERS_REVISION[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_JAVA_SOVERS_MINOR ${_lt_vers_am_contents})
string (REGEX REPLACE ".*LT_JAVA_VERS_AGE[ \t]+=[ \t]+([0-9]*).*$"
"\\1" H5_JAVA_SOVERS_RELEASE ${_lt_vers_am_contents})
math (EXPR H5_JAVA_SOVERS_MAJOR ${H5_JAVA_SOVERS_INTERFACE}-${H5_JAVA_SOVERS_RELEASE})
message (VERBOSE "SOVERSION_JAVA: ${H5_JAVA_SOVERS_MAJOR}.${H5_JAVA_SOVERS_RELEASE}.${H5_JAVA_SOVERS_MINOR}")
endif ()
#-----------------------------------------------------------------------------
# Basic HDF5 stuff here
#-----------------------------------------------------------------------------
set (HDF5_PACKAGE "hdf5")
set (HDF5_PACKAGE_NAME "HDF5")
set (HDF5_PACKAGE_VERSION "${H5_VERS_MAJOR}.${H5_VERS_MINOR}.${H5_VERS_RELEASE}")
set (HDF5_PACKAGE_VERSION_MAJOR "${H5_VERS_MAJOR}.${H5_VERS_MINOR}")
set (HDF5_PACKAGE_VERSION_MINOR "${H5_VERS_RELEASE}")
if (H5_VERS_SUBRELEASE)
set (HDF5_PACKAGE_VERSION_STRING "${HDF5_PACKAGE_VERSION}.${H5_VERS_SUBRELEASE}")
set (HDF5_RELEASE_VERSION_STRING "${HDF5_PACKAGE_VERSION}-${H5_VERS_SUBRELEASE}")
else ()
set (HDF5_PACKAGE_VERSION_STRING "${HDF5_PACKAGE_VERSION}")
set (HDF5_RELEASE_VERSION_STRING "${HDF5_PACKAGE_VERSION}")
endif ()
set (HDF5_LIB_PACKAGE_SOVERSION "${H5_LIB_SOVERS_MAJOR}.${H5_LIB_SOVERS_RELEASE}.${H5_LIB_SOVERS_MINOR}")
set (HDF5_LIB_PACKAGE_SOVERSION_MAJOR "${H5_LIB_SOVERS_MAJOR}")
if (H5_TOOLS_SOVERS_EXISTS)
set (HDF5_TOOLS_PACKAGE_SOVERSION "${H5_TOOLS_SOVERS_MAJOR}.${H5_TOOLS_SOVERS_RELEASE}.${H5_TOOLS_SOVERS_MINOR}")
set (HDF5_TOOLS_PACKAGE_SOVERSION_MAJOR "${H5_TOOLS_SOVERS_MAJOR}")
else ()
set (HDF5_TOOLS_PACKAGE_SOVERSION "${H5_LIB_SOVERS_MAJOR}.${H5_LIB_SOVERS_RELEASE}.${H5_LIB_SOVERS_MINOR}")
set (HDF5_TOOLS_PACKAGE_SOVERSION_MAJOR "${H5_LIB_SOVERS_MAJOR}")
endif ()
if (H5_CXX_SOVERS_EXISTS)
set (HDF5_CXX_PACKAGE_SOVERSION "${H5_CXX_SOVERS_MAJOR}.${H5_CXX_SOVERS_RELEASE}.${H5_CXX_SOVERS_MINOR}")
set (HDF5_CXX_PACKAGE_SOVERSION_MAJOR "${H5_CXX_SOVERS_MAJOR}")
else ()
set (HDF5_CXX_PACKAGE_SOVERSION "${H5_LIB_SOVERS_MAJOR}.${H5_LIB_SOVERS_RELEASE}.${H5_LIB_SOVERS_MINOR}")
set (HDF5_CXX_PACKAGE_SOVERSION_MAJOR "${H5_LIB_SOVERS_MAJOR}")
endif ()
if (H5_F_SOVERS_EXISTS)
set (HDF5_F_PACKAGE_SOVERSION "${H5_F_SOVERS_MAJOR}.${H5_F_SOVERS_RELEASE}.${H5_F_SOVERS_MINOR}")
set (HDF5_F_PACKAGE_SOVERSION_MAJOR "${H5_F_SOVERS_MAJOR}")
else ()
set (HDF5_F_PACKAGE_SOVERSION "${H5_LIB_SOVERS_MAJOR}.${H5_LIB_SOVERS_RELEASE}.${H5_LIB_SOVERS_MINOR}")
set (HDF5_F_PACKAGE_SOVERSION_MAJOR "${H5_LIB_SOVERS_MAJOR}")
endif ()
if (H5_HL_SOVERS_EXISTS)
set (HDF5_HL_PACKAGE_SOVERSION "${H5_HL_SOVERS_MAJOR}.${H5_HL_SOVERS_RELEASE}.${H5_HL_SOVERS_MINOR}")
set (HDF5_HL_PACKAGE_SOVERSION_MAJOR "${H5_HL_SOVERS_MAJOR}")
else ()
set (HDF5_HL_PACKAGE_SOVERSION "${H5_LIB_SOVERS_MAJOR}.${H5_LIB_SOVERS_RELEASE}.${H5_LIB_SOVERS_MINOR}")
set (HDF5_HL_PACKAGE_SOVERSION_MAJOR "${H5_LIB_SOVERS_MAJOR}")
endif ()
if (H5_HL_F_SOVERS_EXISTS)
set (HDF5_HL_CXX_PACKAGE_SOVERSION "${H5_HL_CXX_SOVERS_MAJOR}.${H5_HL_CXX_SOVERS_RELEASE}.${H5_HL_CXX_SOVERS_MINOR}")
set (HDF5_HL_CXX_PACKAGE_SOVERSION_MAJOR "${H5_HL_CXX_SOVERS_MAJOR}")
else ()
set (HDF5_HL_CXX_PACKAGE_SOVERSION "${H5_LIB_SOVERS_MAJOR}.${H5_LIB_SOVERS_RELEASE}.${H5_LIB_SOVERS_MINOR}")
set (HDF5_HL_CXX_PACKAGE_SOVERSION_MAJOR "${H5_LIB_SOVERS_MAJOR}")
endif ()
if (H5_HL_F_SOVERS_EXISTS)
set (HDF5_HL_F_PACKAGE_SOVERSION "${H5_HL_F_SOVERS_MAJOR}.${H5_HL_F_SOVERS_RELEASE}.${H5_HL_F_SOVERS_MINOR}")
set (HDF5_HL_F_PACKAGE_SOVERSION_MAJOR "${H5_HL_F_SOVERS_MAJOR}")
else ()
set (HDF5_HL_F_PACKAGE_SOVERSION "${H5_LIB_SOVERS_MAJOR}.${H5_LIB_SOVERS_RELEASE}.${H5_LIB_SOVERS_MINOR}")
set (HDF5_HL_F_PACKAGE_SOVERSION_MAJOR "${H5_LIB_SOVERS_MAJOR}")
endif ()
if (H5_JAVA_SOVERS_EXISTS)
set (HDF5_JAVA_PACKAGE_SOVERSION "${H5_JAVA_SOVERS_MAJOR}.${H5_JAVA_SOVERS_RELEASE}.${H5_JAVA_SOVERS_MINOR}")
set (HDF5_JAVA_PACKAGE_SOVERSION_MAJOR "${H5_JAVA_SOVERS_MAJOR}")
else ()
set (HDF5_JAVA_PACKAGE_SOVERSION "${H5_LIB_SOVERS_MAJOR}.${H5_LIB_SOVERS_RELEASE}.${H5_LIB_SOVERS_MINOR}")
set (HDF5_JAVA_PACKAGE_SOVERSION_MAJOR "${H5_LIB_SOVERS_MAJOR}")
endif ()
set (HDF5_PACKAGE_STRING "${HDF5_PACKAGE_NAME} ${HDF5_PACKAGE_VERSION_STRING}")
set (HDF5_PACKAGE_TARNAME "${HDF5_PACKAGE}${HDF_PACKAGE_EXT}")
set (HDF5_PACKAGE_URL "http://www.hdfgroup.org")
set (HDF5_PACKAGE_BUGREPORT "help@hdfgroup.org")
#-----------------------------------------------------------------------------
# Set variables needed for installation
#-----------------------------------------------------------------------------
set (HDF5_VERSION_STRING ${HDF5_PACKAGE_VERSION})
set (HDF5_VERSION_MAJOR ${HDF5_PACKAGE_VERSION_MAJOR})
set (HDF5_VERSION_MINOR ${HDF5_PACKAGE_VERSION_MINOR})
#-----------------------------------------------------------------------------
# Include some macros for reusable code
#-----------------------------------------------------------------------------
include (${HDF_RESOURCES_DIR}/HDFMacros.cmake)
HDF_DIR_PATHS(${HDF5_PACKAGE_NAME})
include (${HDF_RESOURCES_DIR}/HDFLibMacros.cmake)
include (${HDF_RESOURCES_DIR}/HDF5PluginMacros.cmake)
include (${HDF_RESOURCES_DIR}/HDF5Macros.cmake)
#-----------------------------------------------------------------------------
# Targets built within this project are exported at Install time for use
# by other projects.
#-----------------------------------------------------------------------------
if (NOT HDF5_EXPORTED_TARGETS)
set (HDF5_EXPORTED_TARGETS "hdf5-targets")
endif ()
#-----------------------------------------------------------------------------
# To include a library in the list exported by the project AT BUILD TIME,
# add it to this variable. This is NOT used by Make Install, but for projects
# which include hdf5 as a sub-project within their build tree
#-----------------------------------------------------------------------------
set_global_variable (HDF5_LIBRARIES_TO_EXPORT "")
set_global_variable (HDF5_UTILS_TO_EXPORT "")
set (EXTERNAL_HEADER_LIST "")
set (EXTERNAL_LIBRARY_LIST "")
set (EXTERNAL_LIBRARYDLL_LIST "")
#-----------------------------------------------------------------------------
# Run all the CMake configuration tests for our build environment
#-----------------------------------------------------------------------------
include (${HDF_RESOURCES_DIR}/ConfigureChecks.cmake)
set (CMAKE_INCLUDE_CURRENT_DIR_IN_INTERFACE ON)
#-----------------------------------------------------------------------------
# Include directories in the source or build tree should come before other
# directories to prioritize headers in the sources over installed ones.
#-----------------------------------------------------------------------------
set(CMAKE_INCLUDE_DIRECTORIES_PROJECT_BEFORE ON)
#-----------------------------------------------------------------------------
# Mac OS X Options
#-----------------------------------------------------------------------------
if (HDF5_BUILD_FRAMEWORKS AND NOT BUILD_SHARED_LIBS)
set (BUILD_SHARED_LIBS ON CACHE BOOL "Build Shared Libraries" FORCE)
endif ()
#-----------------------------------------------------------------------------
# Option to Build Shared and Static libs, default is both
#-----------------------------------------------------------------------------
option (ONLY_SHARED_LIBS "Only Build Shared Libraries" OFF)
mark_as_advanced (ONLY_SHARED_LIBS)
option (BUILD_STATIC_LIBS "Build Static Libraries" ON)
set (H5_ENABLE_STATIC_LIB NO)
option (BUILD_SHARED_LIBS "Build Shared Libraries" ON)
set (H5_ENABLE_SHARED_LIB NO)
# only shared libraries is true if user forces static OFF
if (NOT BUILD_STATIC_LIBS)
set (ONLY_SHARED_LIBS ON CACHE BOOL "Only Build Shared Libraries" FORCE)
endif ()
# only shared libraries is set ON by user then force settings
if (ONLY_SHARED_LIBS)
set (H5_ENABLE_STATIC_LIB NO)
set (BUILD_SHARED_LIBS ON CACHE BOOL "Build Shared Libraries" FORCE)
set (BUILD_STATIC_LIBS OFF CACHE BOOL "Build Static Libraries" FORCE)
endif ()
if (BUILD_STATIC_LIBS)
set (H5_ENABLE_STATIC_LIB YES)
endif ()
if (BUILD_SHARED_LIBS)
set (H5_ENABLE_SHARED_LIB YES)
endif ()
set (CMAKE_POSITION_INDEPENDENT_CODE ON)
if (NOT BUILD_SHARED_LIBS)
set (tgt_file_ext "")
else ()
set (tgt_file_ext "-shared")
endif ()
#-----------------------------------------------------------------------------
# perl is used in some optional src and tests, check availability
find_package (Perl)
if (PERL_FOUND)
set (H5_PERL_FOUND YES)
endif ()
#-----------------------------------------------------------------------------
#-----------------------------------------------------------------------------
# Option to Build Static executables
#-----------------------------------------------------------------------------
option (BUILD_STATIC_EXECS "Build Static Executables" OFF)
if (BUILD_STATIC_EXECS)
if (NOT WIN32)
set (CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -static")
set (CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -static")
endif ()
endif ()
option (HDF5_ENABLE_ANALYZER_TOOLS "enable the use of Clang tools" OFF)
mark_as_advanced (HDF5_ENABLE_ANALYZER_TOOLS)
if (HDF5_ENABLE_ANALYZER_TOOLS)
include (${HDF5_SOURCE_DIR}/config/sanitizer/tools.cmake)
endif ()
option (HDF5_ENABLE_SANITIZERS "execute the Clang sanitizer" OFF)
mark_as_advanced (HDF5_ENABLE_SANITIZERS)
if (HDF5_ENABLE_SANITIZERS)
include (${HDF5_SOURCE_DIR}/config/sanitizer/sanitizers.cmake)
endif ()
option (HDF5_ENABLE_FORMATTERS "format source files" OFF)
mark_as_advanced (HDF5_ENABLE_FORMATTERS)
if (HDF5_ENABLE_FORMATTERS)
include (${HDF5_SOURCE_DIR}/config/sanitizer/formatting.cmake)
endif ()
#-----------------------------------------------------------------------------
# Option to use code coverage
#-----------------------------------------------------------------------------
option (HDF5_ENABLE_COVERAGE "Enable code coverage for Libraries and Programs" OFF)
if (HDF5_ENABLE_COVERAGE)
include (${HDF5_SOURCE_DIR}/config/sanitizer/code-coverage.cmake)
if(CODE_COVERAGE AND CODE_COVERAGE_ADDED)
add_code_coverage () # Adds instrumentation to all targets
else ()
set (CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -g -O0 --coverage -fprofile-arcs -ftest-coverage")
set (CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -g --coverage -O0 -fprofile-arcs -ftest-coverage")
if (CMAKE_C_COMPILER_ID STREQUAL "GNU")
set (LDFLAGS "${LDFLAGS} -fprofile-arcs -ftest-coverage")
link_libraries (gcov)
else ()
set (CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} --coverage")
endif ()
endif ()
endif ()
#-----------------------------------------------------------------------------
# Option to indicate using a memory checker
#-----------------------------------------------------------------------------
option (HDF5_ENABLE_USING_MEMCHECKER "Indicate that a memory checker is used" OFF)
if (HDF5_ENABLE_USING_MEMCHECKER)
set (H5_USING_MEMCHECKER 1)
endif ()
#-----------------------------------------------------------------------------
# Option to enable/disable using pread/pwrite for VFDs
#-----------------------------------------------------------------------------
option (HDF5_ENABLE_PREADWRITE "Use pread/pwrite in sec2/log/core VFDs in place of read/write (when available)" ON)
mark_as_advanced (HDF5_ENABLE_PREADWRITE)
if (HDF5_ENABLE_PREADWRITE AND H5_HAVE_PREAD AND H5_HAVE_PWRITE)
set (H5_HAVE_PREADWRITE 1)
endif ()
#-----------------------------------------------------------------------------
# Option to use deprecated public API symbols
#-----------------------------------------------------------------------------
option (HDF5_ENABLE_DEPRECATED_SYMBOLS "Enable deprecated public API symbols" ON)
if (HDF5_ENABLE_DEPRECATED_SYMBOLS)
set (H5_NO_DEPRECATED_SYMBOLS 0)
else ()
set (H5_NO_DEPRECATED_SYMBOLS 1)
endif ()
#-----------------------------------------------------------------------------
# When building utility executables that generate other (source) files :
# we make use of the following variables defined in the root CMakeLists.
# Certain systems may add /Debug or /Release to output paths
# and we need to call the executable from inside the CMake configuration
#-----------------------------------------------------------------------------
if (WIN32)
add_compile_definitions (_CRT_SECURE_NO_WARNINGS)
if (MSVC)
add_compile_definitions (_BIND_TO_CURRENT_VCLIBS_VERSION=1 _CONSOLE)
endif ()
endif ()
option (HDF5_MINGW_STATIC_GCC_LIBS "Statically link libgcc/libstdc++" OFF)
if (MSVC)
set (CMAKE_MFC_FLAG 0)
set (WIN_COMPILE_FLAGS "")
set (WIN_LINK_FLAGS "")
endif ()
# Do not generate test programs by default
option (HDF5_BUILD_GENERATORS "Build Test Generators" OFF)
#-----------------------------------------------------------------------------
# Add some definitions for Debug Builds
#-----------------------------------------------------------------------------
option (HDF5_ENABLE_TRACE "Enable API tracing capability" OFF)
mark_as_advanced (HDF5_ENABLE_TRACE)
if (${HDF_CFG_NAME} MATCHES "Debug" OR ${HDF_CFG_NAME} MATCHES "Developer")
# Enable instrumenting of the library's internal operations
option (HDF5_ENABLE_INSTRUMENT "Instrument The library" OFF)
# Instrumenting is enabled by default for parallel debug builds
if (HDF5_ENABLE_PARALLEL)
set (HDF5_ENABLE_INSTRUMENT ON CACHE BOOL "Instrument The library" FORCE)
endif ()
if (HDF5_ENABLE_INSTRUMENT)
set (H5_HAVE_INSTRUMENTED_LIBRARY 1)
endif ()
mark_as_advanced (HDF5_ENABLE_INSTRUMENT)
endif ()
#-----------------------------------------------------------------------------
# Add some definitions for Developer Builds
#-----------------------------------------------------------------------------
if (${HDF_CFG_NAME} MATCHES "Developer")
include (${HDF_RESOURCES_DIR}/HDF5DeveloperBuild.cmake)
endif ()
#-----------------------------------------------------------------------------
# Option to embed library info into executables
#-----------------------------------------------------------------------------
if (CMAKE_SYSTEM_NAME STREQUAL "Emscripten")
set (H5_HAVE_EMBEDDED_LIBINFO 0)
else ()
option (HDF5_ENABLE_EMBEDDED_LIBINFO "embed library info into executables" ON)
if (HDF5_ENABLE_EMBEDDED_LIBINFO)
set (H5_HAVE_EMBEDDED_LIBINFO 1)
endif ()
endif ()
include (${HDF_RESOURCES_DIR}/HDFCompilerFlags.cmake)
set (CMAKE_MODULE_PATH ${HDF_RESOURCES_DIR} ${CMAKE_MODULE_PATH})
#-----------------------------------------------------------------------------
# Option to Enable HDFS
#-----------------------------------------------------------------------------
option (HDF5_ENABLE_HDFS "Enable HDFS" OFF)
if (HDF5_ENABLE_HDFS)
find_package(JNI REQUIRED)
if (JNI_FOUND)
set (H5_HAVE_LIBJVM 1)
endif ()
find_package(HDFS REQUIRED)
if (HDFS_FOUND)
set (H5_HAVE_LIBHDFS 1)
set (H5_HAVE_HDFS_H 1)
if (NOT MSVC)
list (APPEND LINK_LIBS -pthread)
endif ()
else ()
message (FATAL_ERROR "Set to use libhdfs library, but could not find or use libhdfs. Please verify that the path to HADOOP_HOME is valid, and/or reconfigure without HDF5_ENABLE_HDFS")
endif ()
endif ()
#-----------------------------------------------------------------------------
# Option to Enable MPI Parallel
#-----------------------------------------------------------------------------
option (HDF5_ENABLE_PARALLEL "Enable parallel build (requires MPI)" OFF)
if (HDF5_ENABLE_PARALLEL)
find_package(MPI REQUIRED)
if (MPI_C_FOUND)
set (H5_HAVE_PARALLEL 1)
# Require MPI standard 3.0 and greater
if (MPI_VERSION LESS 3)
message (FATAL_ERROR "HDF5 requires MPI standard 3.0 or greater")
endif ()
# MPI checks, only do these if MPI_C_FOUND is true, otherwise they always fail
# and once set, they are cached as false and not regenerated
set (CMAKE_REQUIRED_LIBRARIES "${MPI_C_LIBRARIES}")
set (CMAKE_REQUIRED_INCLUDES "${MPI_C_INCLUDE_DIRS}")
# Used by Fortran + MPI
CHECK_SYMBOL_EXISTS (MPI_Comm_c2f "mpi.h" H5_HAVE_MPI_MULTI_LANG_Comm)
CHECK_SYMBOL_EXISTS (MPI_Info_c2f "mpi.h" H5_HAVE_MPI_MULTI_LANG_Info)
# Used by Parallel Compression feature
set (PARALLEL_FILTERED_WRITES ON)
CHECK_SYMBOL_EXISTS (MPI_Ibarrier "mpi.h" H5_HAVE_MPI_Ibarrier)
CHECK_SYMBOL_EXISTS (MPI_Issend "mpi.h" H5_HAVE_MPI_Issend)
CHECK_SYMBOL_EXISTS (MPI_Iprobe "mpi.h" H5_HAVE_MPI_Iprobe)
CHECK_SYMBOL_EXISTS (MPI_Irecv "mpi.h" H5_HAVE_MPI_Irecv)
if (H5_HAVE_MPI_Ibarrier AND H5_HAVE_MPI_Issend AND H5_HAVE_MPI_Iprobe AND H5_HAVE_MPI_Irecv)
set (H5_HAVE_PARALLEL_FILTERED_WRITES 1)
else ()
message (WARNING "The MPI_Ibarrier/MPI_Issend/MPI_Iprobe/MPI_Irecv functions could not be located.
Parallel writes of filtered data will be disabled.")
set (PARALLEL_FILTERED_WRITES OFF)
endif ()
# Used by big I/O feature
set (LARGE_PARALLEL_IO ON)
CHECK_SYMBOL_EXISTS (MPI_Get_elements_x "mpi.h" H5_HAVE_MPI_Get_elements_x)
CHECK_SYMBOL_EXISTS (MPI_Type_size_x "mpi.h" H5_HAVE_MPI_Type_size_x)
if (NOT H5_HAVE_MPI_Get_elements_x OR NOT H5_HAVE_MPI_Type_size_x)
message (WARNING "The MPI_Get_elements_x and/or MPI_Type_size_x functions could not be located.
Reading/Writing >2GB of data in a single parallel I/O operation will be disabled.")
set (LARGE_PARALLEL_IO OFF)
endif ()
else ()
message (FATAL_ERROR "Parallel libraries not found")
endif ()
endif ()
# Parallel IO usage requires MPI to be Linked and Included
if (H5_HAVE_PARALLEL)
set (LINK_LIBS ${LINK_LIBS} ${MPI_C_LIBRARIES})
if (MPI_C_LINK_FLAGS)
set (CMAKE_EXE_LINKER_FLAGS "${MPI_C_LINK_FLAGS} ${CMAKE_EXE_LINKER_FLAGS}")
endif ()
endif ()
# Determine whether to build the HDF5 Subfiling VFD
set (H5FD_SUBFILING_DIR ${HDF5_SRC_DIR}/H5FDsubfiling)
set (HDF5_SRC_INCLUDE_DIRS
${HDF5_SRC_INCLUDE_DIRS}
${H5FD_SUBFILING_DIR}
)
option (HDF5_ENABLE_SUBFILING_VFD "Build Parallel HDF5 Subfiling VFD" OFF)
if (HDF5_ENABLE_SUBFILING_VFD)
if (WIN32)
message (FATAL_ERROR " **** Subfiling is not supported on Windows **** ")
endif ()
if (NOT HDF5_ENABLE_PARALLEL)
message (FATAL_ERROR "Subfiling VFD requires a parallel HDF5 build")
else ()
# Check for MPI_Comm_split_type
CHECK_SYMBOL_EXISTS (MPI_Comm_split_type "mpi.h" H5_HAVE_MPI_Comm_split_type)
if (NOT H5_HAVE_MPI_Comm_split_type)
message (FATAL_ERROR "Subfiling VFD requires MPI-3 support for MPI_Comm_split_type")
endif ()
endif ()
if (NOT DEFINED Threads_FOUND)
set (THREADS_PREFER_PTHREAD_FLAG ON)
find_package (Threads REQUIRED)
endif ()
# For now, make sure we're using pthreads. Once Subfiling can be
# supported on Windows, we should allow Win32 threads as well
if (NOT ${Threads_FOUND} OR NOT ${CMAKE_USE_PTHREADS_INIT})
message (FATAL_ERROR "Subfiling requires pthreads for system thread library")
endif ()
CHECK_INCLUDE_FILE("stdatomic.h" HAVE_STDATOMIC_H)
if (NOT HAVE_STDATOMIC_H)
message (FATAL_ERROR "Subfiling VFD requires atomic operations support. C11 stdatomic.h NOT available.")
else()
set (H5_HAVE_STDATOMIC_H 1)
endif()
set (H5_HAVE_SUBFILING_VFD 1)
# IOC VFD is currently only built when subfiling is enabled
set (H5_HAVE_IOC_VFD 1)
message (STATUS "Setting up to use Mercury components")
set (H5FD_SUBFILING_MERCURY_DIR ${H5FD_SUBFILING_DIR}/mercury/src/util)
set (HDF5_SRC_INCLUDE_DIRS
${HDF5_SRC_INCLUDE_DIRS}
${H5FD_SUBFILING_MERCURY_DIR}
)
set (CMAKE_REQUIRED_INCLUDES "${H5FD_SUBFILING_MERCURY_DIR}")
# Run some configure checks for the Mercury util files
set (CMAKE_EXTRA_INCLUDE_FILES pthread.h)
set (CMAKE_REQUIRED_LIBRARIES ${CMAKE_THREAD_LIBS_INIT})
check_type_size(PTHREAD_MUTEX_ADAPTIVE_NP PTHREAD_MUTEX_ADAPTIVE_NP_SIZE)
if (HAVE_PTHREAD_MUTEX_ADAPTIVE_NP_SIZE)
set (${HDF_PREFIX}_HAVE_PTHREAD_MUTEX_ADAPTIVE_NP 1)
endif ()
check_symbol_exists(pthread_condattr_setclock pthread.h
${HDF_PREFIX}_HAVE_PTHREAD_CONDATTR_SETCLOCK)
unset (CMAKE_EXTRA_INCLUDE_FILES)
unset (CMAKE_REQUIRED_LIBRARIES)
endif()
#option (DEFAULT_API_VERSION "Enable v1.16 API (v16, v18, v110, v112, v114, v116)" "v116")
set (DEFAULT_API_VERSION "v116" CACHE STRING "Enable v1.16 API (v16, v18, v110, v112, v114, v116)")
set_property (CACHE DEFAULT_API_VERSION PROPERTY STRINGS v16 v18 v110 v112 v114 v116)
#-----------------------------------------------------------------------------
# Option to use 1.6.x API
#-----------------------------------------------------------------------------
set (H5_USE_16_API_DEFAULT 0)
if (DEFAULT_API_VERSION MATCHES "v16")
set (H5_USE_16_API_DEFAULT 1)
endif ()
#-----------------------------------------------------------------------------
# Option to use 1.8.x API
#-----------------------------------------------------------------------------
set (H5_USE_18_API_DEFAULT 0)
if (DEFAULT_API_VERSION MATCHES "v18")
set (H5_USE_18_API_DEFAULT 1)
endif ()
#-----------------------------------------------------------------------------
# Option to use 1.10.x API
#-----------------------------------------------------------------------------
set (H5_USE_110_API_DEFAULT 0)
if (DEFAULT_API_VERSION MATCHES "v110")
set (H5_USE_110_API_DEFAULT 1)
endif ()
#-----------------------------------------------------------------------------
# Option to use 1.12.x API
#-----------------------------------------------------------------------------
set (H5_USE_112_API_DEFAULT 0)
if (DEFAULT_API_VERSION MATCHES "v112")
set (H5_USE_112_API_DEFAULT 1)
endif ()
#-----------------------------------------------------------------------------
# Option to use 1.14.x API
#-----------------------------------------------------------------------------
set (H5_USE_114_API_DEFAULT 0)
if (DEFAULT_API_VERSION MATCHES "v114")
set (H5_USE_114_API_DEFAULT 1)
endif ()
#-----------------------------------------------------------------------------
# Option to use 1.16.x API
#-----------------------------------------------------------------------------
if (NOT DEFAULT_API_VERSION)
set (DEFAULT_API_VERSION "v116")
endif ()
set (H5_USE_116_API_DEFAULT 0)
if (DEFAULT_API_VERSION MATCHES "v116")
set (H5_USE_116_API_DEFAULT 1)
endif ()
#-----------------------------------------------------------------------------
# Include user macros
#-----------------------------------------------------------------------------
include (UserMacros.cmake)
#-----------------------------------------------------------------------------
# Include filter (zlib, szip, etc.) macros
#-----------------------------------------------------------------------------
include (CMakeFilters.cmake)
#-----------------------------------------------------------------------------
# Include external VOL connectors
#-----------------------------------------------------------------------------
include (CMakeVOL.cmake)
#-----------------------------------------------------------------------------
# Option for external libraries on windows
#-----------------------------------------------------------------------------
option (HDF5_PACKAGE_EXTLIBS "CPACK - include external libraries" OFF)
if (NOT HDF5_EXTERNALLY_CONFIGURED)
if (HDF5_PACKAGE_EXTLIBS)
set (HDF5_NO_PACKAGES OFF CACHE BOOL "CPACK - Disable packaging" FORCE)
endif ()
endif ()
#-----------------------------------------------------------------------------
# Option to use threadsafe
#-----------------------------------------------------------------------------
option (HDF5_ENABLE_THREADSAFE "Enable thread-safety" OFF)
if (HDF5_ENABLE_THREADSAFE)
# check for unsupported options
if (WIN32)
if (BUILD_STATIC_LIBS)
message (FATAL_ERROR " **** thread-safety option not supported with static library **** ")
endif ()
endif ()
if (HDF5_BUILD_FORTRAN)
if (NOT ALLOW_UNSUPPORTED)
message (FATAL_ERROR " **** Fortran and thread-safety options are not supported, override with ALLOW_UNSUPPORTED option **** ")
else ()
message (VERBOSE " **** Allowing unsupported Fortran and thread-safety options **** ")
endif ()
endif ()
if (HDF5_BUILD_CPP_LIB)
if (NOT ALLOW_UNSUPPORTED)
message (FATAL_ERROR " **** C++ and thread-safety options are not supported, override with ALLOW_UNSUPPORTED option **** ")
else ()
message (VERBOSE " **** Allowing unsupported C++ and thread-safety options **** ")
endif ()
endif ()
if (HDF5_BUILD_HL_LIB)
if (NOT ALLOW_UNSUPPORTED)
message (FATAL_ERROR " **** HL and thread-safety options are not supported, override with ALLOW_UNSUPPORTED option **** ")
else ()
message (VERBOSE " **** Allowing unsupported HL and thread-safety options **** ")
endif ()
endif ()
if (H5_HAVE_IOEO)
message (VERBOSE " **** Win32 threads requires WINVER>=0x600 (Windows Vista/7/8) **** ")
set (H5_HAVE_WIN_THREADS 1)
else ()
if (NOT H5_HAVE_PTHREAD_H)
message (FATAL_ERROR " **** thread-safe option requires Win32 threads or Pthreads **** ")
endif ()
endif ()
set (THREADS_PREFER_PTHREAD_FLAG ON)
find_package (Threads REQUIRED)
if (Threads_FOUND)
set (H5_HAVE_THREADSAFE 1)
endif ()
endif ()
#-----------------------------------------------------------------------------
# Option to build the map API
#-----------------------------------------------------------------------------
option (HDF5_ENABLE_MAP_API "Build the map API" OFF)
if (HDF5_ENABLE_MAP_API)
set (H5_HAVE_MAP_API 1)
endif ()
#-----------------------------------------------------------------------------
# Add the HDF5 Library Target to the build
#-----------------------------------------------------------------------------
add_subdirectory (src)
if (HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "GIT" OR HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "TGZ")
if ((ZLIB_FOUND AND ZLIB_USE_EXTERNAL) OR (SZIP_FOUND AND SZIP_USE_EXTERNAL))
if (BUILD_STATIC_LIBS)
add_dependencies (${HDF5_LIB_TARGET} ${LINK_COMP_LIBS})
endif ()
if (BUILD_SHARED_LIBS)
add_dependencies (${HDF5_LIBSH_TARGET} ${LINK_COMP_LIBS})
endif ()
endif ()
endif ()
#-----------------------------------------------------------------------------
# Option to build documentation
#-----------------------------------------------------------------------------
option (HDF5_BUILD_DOC "Build documentation" OFF)
if (HDF5_BUILD_DOC AND EXISTS "${HDF5_DOXYGEN_DIR}" AND IS_DIRECTORY "${HDF5_DOXYGEN_DIR}")
# check if Doxygen is installed
find_package(Doxygen)
if (DOXYGEN_FOUND)
option (HDF5_ENABLE_DOXY_WARNINGS "Enable fail if doxygen parsing has warnings." ON)
mark_as_advanced (HDF5_ENABLE_DOXY_WARNINGS)
if (HDF5_ENABLE_DOXY_WARNINGS)
set (HDF5_DOXY_WARNINGS "FAIL_ON_WARNINGS")
else ()
set (HDF5_DOXY_WARNINGS "NO")
endif ()
message(STATUS "Doxygen version: ${DOXYGEN_VERSION}")
add_subdirectory (doxygen)
else ()
message(STATUS "Doxygen needs to be installed to generate the doxygen documentation")
endif ()
endif ()
#-----------------------------------------------------------------------------
# Dashboard and Testing Settings
#-----------------------------------------------------------------------------
option (BUILD_TESTING "Build HDF5 Unit Testing" ON)
if (BUILD_TESTING)
include (CMakeTests.cmake)
endif ()
#-----------------------------------------------------------------------------
# Option to build HDF5 Utilities
#-----------------------------------------------------------------------------
if (EXISTS "${HDF5_SOURCE_DIR}/utils" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/utils")
option (HDF5_BUILD_PARALLEL_TOOLS "Build Parallel HDF5 Tools" OFF)
if (HDF5_BUILD_PARALLEL_TOOLS AND HDF5_ENABLE_PARALLEL)
set (CMAKE_PREFIX_PATH "$HDF_RESOURCES_DIR")
find_package(MFU REQUIRED)
if (MFU_FOUND)
message(STATUS "LL_PATH=${LL_PATH}")
set (H5_HAVE_LIBMFU 1)
set (H5_HAVE_MFU_H 1)
set (CMAKE_REQUIRED_INCLUDES "${MFU_INCLUDE_DIR}")
set (MFU_LIBRARY_DEBUG "$MFU_LIBRARY")
set (MFU_LIBRARY_RELEASE "$MFU_LIBRARY")
endif ()
find_package(CIRCLE REQUIRED)