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DESCRIPTION
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Package: PALM
Type: Package
Title: Fast and reliable association discovery in large-scale microbiome studies and meta-analyses
Version: 0.1.0
Author: Zhoujingpeng Wei
Maintainer: Zhoujingpeng Wei <zwei74@wisc.edu>
Description: This R package implements a quasi-Poisson-based framework designed for robust, scalable, and reproducible identification of covariate-associated microbial features in large-scale microbiome association studies and meta-analyses.
Data: 2024-11-23
Reference: Wei et al. 'Fast and reliable association discovery in large-scale microbiome studies and meta-analyses using PALM'. Submitted.
License: GPL (>= 3) | file LICENSE
LinkingTo: Rcpp, RcppArmadillo
Imports:
MASS (>= 7.3-60),
dplyr (>= 1.1.4),
brglm2 (>= 0.9.2),
Rcpp (>= 1.0.14),
RcppArmadillo (>= 14.2.2-1)
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3
Suggests:
knitr,
rmarkdown
Depends:
R (>= 4.3.0)
VignetteBuilder: knitr