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run_multar_gnia.py
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import torch
import time
import sys
import os
import math
import argparse
import numpy as np
import scipy.sparse as sp
import torch.nn as nn
import torch.nn.functional as F
# import torch.distributed as dist
# from torch.nn.parallel import DistributedDataParallel as DDP
import torch.utils.data as Data
np_load_old = np.load
np.aload = lambda *a,**k: np_load_old(*a, allow_pickle=True, **k)
from gnia import GNIA
sys.path.append('..')
from utils import *
from surrogate_model.gcn import GCN
from surrogate_model.gat import GAT, LayerType
from surrogate_model.appnp import PPNP, PPRPowerIteration
setup_seed(123)
def main(opts):
# hyperparameters
gpu_id = opts['gpu']
seed = opts['seed']
surro_type = opts['surro_type']
victim_type = opts['victim_type']
dataset= opts['dataset']
tar_num = opts['tar_num']
print("Dataset:",dataset)
print("Multi targets:",opts['tar_num'])
connect = opts['connect']
multi = opts['multiedge']
discrete = opts['discrete']
suffix = opts['suffix']
attr_tau = float(opts['attrtau']) if opts['attrtau']!=None else opts['attrtau']
edge_tau = float(opts['edgetau']) if opts['edgetau']!=None else opts['edgetau']
lr = opts['lr']
patience = opts['patience']
best_score = opts['best_score']
counter = opts['counter']
nepochs = opts['nepochs']
st_epoch = opts['st_epoch']
epsilon_start = opts['epsst']
epsilon_end = 0
epsilon_decay = opts['epsdec']
total_steps = 500
batch_size = opts['batchsize']
nhid = opts['nhid']
nhead = opts['nhead']
# local_rank = opts['local_rank']
# torch.cuda.set_device(local_rank)
# dist.init_process_group(backend='nccl')
surro_save_file = 'checkpoint/surrogate_model/' + dataset + '_' + surro_type
victim_save_file = 'checkpoint/surrogate_model/' + dataset + '_' + surro_type
ckpt_save_dirs = 'checkpoint/' + surro_type + '_gnia/'
output_save_dirs = 'output/' + surro_type + '_gnia/'
model_save_file = ckpt_save_dirs + dataset + '_' + suffix
if not os.path.exists(ckpt_save_dirs):
os.makedirs(ckpt_save_dirs)
if not os.path.exists(output_save_dirs):
os.makedirs(output_save_dirs)
os.environ["CUDA_VISIBLE_DEVICES"] = gpu_id
device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
# Preprocessing data
adj, features, labels_np = load_npz(f'datasets/{dataset}.npz')
n = adj.shape[0]
nc = labels_np.max()+1
nfeat = features.shape[1]
adj = adj + adj.T.multiply(adj.T > adj) - adj.multiply(adj.T > adj) + sp.eye(n)
adj[adj > 1] = 1
if connect:
lcc = largest_connected_components(adj)
adj = adj[lcc][:, lcc]
features = features[lcc]
labels_np = labels_np[lcc]
n = adj.shape[0]
print('Nodes num:',n)
adj_tensor = sparse_mx_to_torch_sparse_tensor(adj).to(device)
nor_adj_tensor = normalize_tensor(adj_tensor)
feat = torch.from_numpy(features.todense().astype('double')).float().to(device)
feat_max = feat.max(0).values
feat_min = feat.min(0).values
labels = torch.LongTensor(labels_np).to(device)
degree = adj.sum(1)
deg = torch.FloatTensor(degree).flatten().to(device)
feat_num = int(features.sum(1).mean())
eps_threshold = [epsilon_end + (epsilon_start - epsilon_end) * math.exp(-1. * steps / epsilon_decay) for steps in range(total_steps)]
if not os.path.exists('datasets/multargets_'+dataset + '_tarnum' + str(tar_num) + '.npy'):
obtain_multi_targets(dataset, tar_num, adj)
real_targets_arr = np.load('datasets/multargets_'+dataset + '_tarnum' + str(tar_num) + '.npy')
print('real_targets_arr',len(real_targets_arr))
split = np.aload('datasets/multargets_'+dataset+ '_tarnum' + str(tar_num) + '_split.npy').item()
train_mask = split['train']
val_mask = split['val']
test_mask = split['test']
print("Surrogate GNN Model:", surro_type)
print("Evaluation GNN Model:", victim_type)
# Surrogate model
if surro_type == 'gcn':
surro_net = GCN(features.shape[1], 64, labels.max().item() + 1, 0.5).float().to(device)
elif surro_type == 'gat':
surro_net = GAT(num_of_layers=2, num_heads_per_layer=[nhead, 1], num_features_per_layer=[nfeat, nhid, nc],
add_skip_connection=False, bias=True, dropout=0.6,
layer_type=LayerType.IMP2, log_attention_weights=False).to(device)
else:
prop_appnp = PPRPowerIteration(alpha=0.1, niter=10)
surro_net = PPNP(nfeat, nc, [64], 0.5, prop_appnp).to(device)
surro_net.load_state_dict(torch.load(surro_save_file+'_checkpoint.pt'))
# Evalution model
if victim_type == 'gcn':
victim_net = GCN(features.shape[1], 64, labels.max().item() + 1, 0.5).float().to(device)
elif victim_type == 'gat':
victim_net = GAT(num_of_layers=2, num_heads_per_layer=[nhead, 1], num_features_per_layer=[nfeat, nhid, nc],
add_skip_connection=False, bias=True, dropout=0.6,
layer_type=LayerType.IMP2, log_attention_weights=False).to(device)
else:
prop_appnp = PPRPowerIteration(alpha=0.1, niter=10)
victim_net = PPNP(nfeat, nc, [64], 0.5, prop_appnp).to(device)
victim_net.load_state_dict(torch.load(victim_save_file+'_checkpoint.pt'))
surro_net.eval()
victim_net.eval()
for p in victim_net.parameters():
p.requires_grad = False
for p in surro_net.parameters():
p.requires_grad = False
if surro_type == 'gcn':
node_emb = surro_net(feat, nor_adj_tensor)
W1 = surro_net.gc1.weight.data.detach()
W2 = surro_net.gc2.weight.data.detach()
elif surro_type == 'gat':
adj_topo_tensor = torch.tensor(adj.toarray(), dtype=torch.float, device=device)
graph_data = (feat, adj_topo_tensor)
node_emb = surro_net(graph_data)[0]
W1 = surro_net.gat_net[0].linear_proj.weight.data.detach().t()
W2 = surro_net.gat_net[1].linear_proj.weight.data.detach().t()
else:
node_emb = surro_net(feat, nor_adj_tensor)
W1 = surro_net.fcs[0].weight.data.detach()
W2 = surro_net.fcs[1].weight.data.detach().t()
W = torch.mm(W1, W2).t()
if victim_type == 'gat':
graph_data = (feat, adj_topo_tensor)
logits = victim_net(graph_data)[0]
else:
logits = victim_net(feat, nor_adj_tensor)
sec = worst_case_class(logits, labels_np)
logp = F.log_softmax(logits, dim=1)
acc = accuracy(logp, labels)
print('Acc:',acc)
print('Train Acc:',accuracy(logp[train_mask], labels[train_mask]))
print('Valid Acc:',accuracy(logp[val_mask], labels[val_mask]))
print('Test Acc:',accuracy(logp[test_mask], labels[test_mask]))
# Initialization
model = GNIA(labels, nfeat, W1, W2, discrete, device, tar_num=opts['tar_num'], feat_min=feat_min, feat_max=feat_max, feat_num=feat_num, attr_tau=attr_tau, edge_tau=edge_tau).to(device)
# model = DDP(model, device_ids=[local_rank], output_device=local_rank, find_unused_parameters=True)
stopper = EarlyStop_loss(patience=patience)
if opts['optimizer'] == 'Adam':
optimizer = torch.optim.Adam([{'params': model.parameters()}], lr=lr)
elif opts['optimizer'] == 'RMSprop':
optimizer = torch.optim.RMSprop([{'params': model.parameters()}], lr=lr, weight_decay=0)
else:
raise ValueError('Unsupported argument for the optimizer')
x = torch.LongTensor(train_mask)
y = labels[train_mask].to(torch.device('cpu'))
torch_dataset = Data.TensorDataset(x,y)
# train_sampler = Data.distributed.DistributedSampler(
# torch_dataset,
# num_replicas=2,
# rank=local_rank,
# )
# batch_loader = Data.DataLoader(dataset=torch_dataset, batch_size=batch_size, num_workers=24, sampler=train_sampler)
batch_loader = Data.DataLoader(dataset=torch_dataset, batch_size=batch_size, num_workers=24)
if st_epoch != 0:
model.load_state_dict(torch.load(model_save_file+'_checkpoint.pt'))
stopper.best_score = best_score
stopper.counter = counter
# Training and Validation
for epoch in range(st_epoch, nepochs):
training = True
print("Epoch {:05d}".format(epoch))
train_atk_success = []
val_atk_success = []
train_loss_arr = []
eps = eps_threshold[epoch] if epoch < len(eps_threshold) else eps_threshold[-1]
for batch_x,_ in batch_loader:
loss_arr = []
for train_batch in batch_x:
real_targets = real_targets_arr[train_batch]
one_order_nei = adj[real_targets].nonzero()[1]
budget = int(min(round(one_order_nei.shape[0]/2), tar_num*round(degree.mean())))
best_wrong_labels = sec[real_targets]
oris = labels[real_targets].cpu().numpy()
if surro_type == 'gat':
one_order_nei, four_order_nei, sub_tar, sub_idx = k_order_nei(adj.toarray(), 3, real_targets)
tar_norm_adj = nor_adj_tensor.to_dense()[sub_tar]
norm_a_target = tar_norm_adj[sub_idx].unsqueeze(1)
sub_feat = feat[four_order_nei]
sub_adj = adj.toarray()[four_order_nei][:,four_order_nei]
sub_adj_tensor = torch.tensor(sub_adj, dtype=torch.float, device=device)
inj_feat, disc_score, masked_score_idx = model(sub_tar, sub_idx, budget, sub_feat, norm_a_target, node_emb[four_order_nei],
W[oris], W[best_wrong_labels], train_flag=training,eps=eps)
new_feat = torch.cat((sub_feat, inj_feat.unsqueeze(0)), 0)
else:
inj_feat, disc_score, masked_score_idx = model(real_targets, one_order_nei, budget, feat, nor_adj_tensor, node_emb,
W[oris], W[best_wrong_labels], train_flag=training, eps=eps)
new_feat = torch.cat((feat, inj_feat.unsqueeze(0)), 0)
if victim_type == 'gat':
new_adj_tensor = gen_new_adj_topo_tensor(sub_adj_tensor, disc_score, sub_idx, device)
new_logits = victim_net((new_feat, new_adj_tensor))[0]
loss = F.relu(new_logits[sub_tar,oris] - new_logits[sub_tar,best_wrong_labels])
new_logp = F.log_softmax(new_logits, dim=1)
train_mis = 1 - (new_logp[sub_tar].argmax(1).cpu().numpy()==oris).mean()
train_atk_success.append(train_mis)
else:
new_adj_tensor = gen_new_adj_tensor(adj_tensor, disc_score, masked_score_idx, device)
new_logits = victim_net(new_feat, normalize_tensor(new_adj_tensor))
loss = sum(F.relu(new_logits[real_targets,oris] - new_logits[real_targets,best_wrong_labels]))
new_logp = F.log_softmax(new_logits, dim=1)
train_mis = 1 - (new_logp[real_targets].argmax(1).cpu().numpy()==oris).mean()
train_atk_success.append(train_mis)
loss_arr.append(loss)
# del new_feat, four_order_nei, new_logits, new_logp, new_adj_tensor
# torch.cuda.empty_cache()
train_loss = np.array(loss_arr).sum()
optimizer.zero_grad()
train_loss.backward()
nn.utils.clip_grad_norm_(model.parameters(), max_norm=1.1)
optimizer.step()
train_loss_arr.append((train_loss/len(loss_arr)).detach().cpu().item())
del loss_arr, train_loss
print('Training set Loss:', np.array(train_loss_arr).mean())
print('Training set: Attack success rate:', np.array(train_atk_success).mean())
del train_loss_arr, train_atk_success
torch.cuda.empty_cache()
val_loss_arr = []
training = False
for val_batch in val_mask:
real_targets = real_targets_arr[val_batch]
one_order_nei = adj[real_targets].nonzero()[1]
budget = int(min(round(one_order_nei.shape[0]/2), tar_num*round(degree.mean())))
best_wrong_labels = sec[real_targets]
oris = labels[real_targets].cpu().numpy()
if surro_type == 'gat':
one_order_nei, four_order_nei, sub_tar, sub_idx = k_order_nei(adj.toarray(), 3, real_targets)
tar_norm_adj = nor_adj_tensor.to_dense()[sub_tar]
norm_a_target = tar_norm_adj[sub_idx].unsqueeze(1)
sub_feat = feat[four_order_nei]
sub_adj = adj.toarray()[four_order_nei][:,four_order_nei]
sub_adj_tensor = torch.tensor(sub_adj, dtype=torch.float, device=device)
inj_feat, disc_score, masked_score_idx = model(sub_tar, sub_idx, budget, sub_feat, norm_a_target, node_emb[four_order_nei],
W[oris], W[best_wrong_labels], train_flag=training,eps=eps)
new_feat = torch.cat((sub_feat, inj_feat.unsqueeze(0)), 0)
else:
inj_feat, disc_score, masked_score_idx = model(real_targets, one_order_nei, budget, feat, nor_adj_tensor, node_emb,
W[oris], W[best_wrong_labels], train_flag=training, eps=eps)
new_feat = torch.cat((feat, inj_feat.unsqueeze(0)), 0)
if victim_type == 'gat':
new_adj_tensor = gen_new_adj_topo_tensor(sub_adj_tensor, disc_score, sub_idx, device)
new_logits = victim_net((new_feat, new_adj_tensor))[0]
loss = F.relu(new_logits[sub_tar,oris] - new_logits[sub_tar,best_wrong_labels])
new_logp = F.log_softmax(new_logits, dim=1)
val_mis = 1 - (new_logp[sub_tar].argmax(1).cpu().numpy()==oris).mean()
val_atk_success.append(val_mis)
else:
new_adj_tensor = gen_new_adj_tensor(adj_tensor, disc_score, masked_score_idx, device)
new_logits = victim_net(new_feat, normalize_tensor(new_adj_tensor))
loss = sum(F.relu(new_logits[real_targets,oris] - new_logits[real_targets,best_wrong_labels]))
new_logp = F.log_softmax(new_logits, dim=1)
val_mis = 1 - (new_logp[real_targets].argmax(1).cpu().numpy()==oris).mean()
val_atk_success.append(val_mis)
val_loss_arr.append(loss.detach().cpu().item())
print('Validation set Loss:', np.array(val_loss_arr).mean())
print('Validation set: Attack success rate:', np.array(val_atk_success).mean())
val_loss = np.array(val_loss_arr).mean()
if stopper.step(val_loss, model, model_save_file):
break
del val_loss_arr, val_atk_success
torch.cuda.empty_cache()
# Test Part
names = locals()
training = False
model.load_state_dict(torch.load(model_save_file+'_checkpoint.pt'))
for p in model.parameters():
p.requires_grad = False
atk_suc = []
for dset in ['train', 'val', 'test']:
names[dset + '_atk_suc'] = []
for batch in names[dset + '_mask']:
real_targets = real_targets_arr[batch]
one_order_nei = adj[real_targets].nonzero()[1]
# target_deg = int(sum([degree[i][0].item() for i in real_targets]))
# budget = int(min(round(target_deg/2), tar_num*round(degree.mean())))
budget = int(min(round(one_order_nei.shape[0]/2), tar_num*round(degree.mean())))
best_wrong_labels = sec[real_targets]
oris = labels[real_targets].cpu().numpy()
if surro_type == 'gat':
one_order_nei, four_order_nei, sub_tar, sub_idx = k_order_nei(adj.toarray(), 3, real_targets)
tar_norm_adj = nor_adj_tensor.to_dense()[sub_tar]
norm_a_target = tar_norm_adj[sub_idx].unsqueeze(1)
sub_feat = feat[four_order_nei]
sub_adj = adj.toarray()[four_order_nei][:,four_order_nei]
sub_adj_tensor = torch.tensor(sub_adj, dtype=torch.float, device=device)
inj_feat, disc_score, masked_score_idx = model(sub_tar, sub_idx, budget, sub_feat, norm_a_target, node_emb[four_order_nei],
W[oris], W[best_wrong_labels], train_flag=training,eps=eps)
new_feat = torch.cat((sub_feat, inj_feat.unsqueeze(0)), 0)
else:
inj_feat, disc_score, masked_score_idx = model(real_targets, one_order_nei, budget, feat, nor_adj_tensor, node_emb,
W[oris], W[best_wrong_labels], train_flag=training, eps=eps)
new_feat = torch.cat((feat, inj_feat.unsqueeze(0)), 0)
if victim_type == 'gat':
new_adj_tensor = gen_new_adj_topo_tensor(sub_adj_tensor, disc_score, sub_idx, device)
new_logits = victim_net((new_feat, new_adj_tensor))[0]
out_tar = sub_tar
else:
new_adj_tensor = gen_new_adj_tensor(adj_tensor, disc_score, masked_score_idx, device)
new_logits = victim_net(new_feat, normalize_tensor(new_adj_tensor))
out_tar = real_targets
new_logp = F.log_softmax(new_logits, dim=1)
feat_nz = new_feat[-1].detach().cpu().nonzero()
edge_nz = disc_score.detach().cpu().nonzero()
print("Feat:", feat_nz.shape[0], feat_nz.squeeze())
print('Edge:', edge_nz.shape[0], edge_nz.squeeze())
for tar in out_tar:
best_wrong_label = sec[tar]
ori = labels[tar].cpu().numpy()
print(dset +' Node: %d, Degree: %d' % (tar, degree[tar]))
print('\t pred: %d, sec: %d, label: %d'%(new_logits[tar].argmax(), best_wrong_label, ori))
if ori != new_logp[tar].argmax().item():
print("\t Attack successfully!!!")
names[dset + '_atk_suc'].append(1)
atk_suc.append(1)
else:
print("\t Attack Failed###")
names[dset + '_atk_suc'].append(0)
atk_suc.append(0)
del new_feat, new_logits, new_logp
print('Attack success rate of '+ dset +' set:', np.array(names[dset + '_atk_suc']).mean())
print('*'*30)
np.save(output_save_dirs + dataset + '_' + suffix + '_atk_success.npy', np.array(atk_suc))
if __name__ == '__main__':
setup_seed(123)
parser = argparse.ArgumentParser(description='GNIA')
# configure
parser.add_argument('--seed', type=int, default=123, help='random seed')
parser.add_argument('--gpu', type=str, default="1", help='GPU ID')
parser.add_argument('--suffix', type=str, default='_', help='suffix of the checkpoint')
# dataset
parser.add_argument('--dataset', default='citeseer',help='dataset to use')
parser.add_argument('--surro_type', default='gcn',help='surrogate gnn model')
parser.add_argument('--victim_type', default='gcn',help='victim gnn model')
parser.add_argument('--connect', default=False, type=bool, help='largest connected component')
parser.add_argument('--multiedge', default=False, type=bool, help='budget of malicious edges connected to injected node')
parser.add_argument('--tar_num', default=3, type=int, help='the number of multi targets')
# optimization
parser.add_argument('--optimizer', choices=['Adam','RMSprop'], default='RMSprop', help='optimizer')
parser.add_argument('--lr', default=0.001, type=float, help='learning rate')
parser.add_argument('--wd', default=0., type=float , help='weight decay')
parser.add_argument('--nepochs', type=int, default=10000, help='number of epochs')
parser.add_argument('--patience', default=100, type=int, help='patience of early stopping')
parser.add_argument('--batchsize', type=int, default=8, help='batchsize')
# Hyperparameters
parser.add_argument('--attrtau', default=None, help='tau of gumbel softmax on attribute on discrete attributed graph')
parser.add_argument('--edgetau', default=None, help='tau of gumbel softmax on edge')
parser.add_argument('--epsdec', default=50, type=float, help='epsilon decay: coefficient of the gumbel sampling')
parser.add_argument('--epsst', default=50, type=int, help='epsilon start: coefficient of the gumbel sampling')
# Ignorable
parser.add_argument('--counter', type=int, default=0, help='counter for recover training (Ignorable)')
parser.add_argument('--best_score', type=float, default=0., help='best score for recover training (Ignorable)')
parser.add_argument('--st_epoch', type=int, default=0, help='start epoch for recover training (Ignorable)')
parser.add_argument('--local_rank', type=int, default=2, help='DDP local rank for parallel (Ignorable)')
args = parser.parse_args()
opts = args.__dict__.copy()
GAT_para = {'12k_reddit':(4,4), '10k_ogbproducts':(6,6), 'citeseer':(8,8)}
opts['nhid'], opts['nhead'] = GAT_para[opts['dataset']]
opts['discrete'] = False if 'k_' in opts['dataset'] else True
print(opts)
att_sucess = main(opts)
'''
CUDA_VISIBLE_DEVICES=1 nohup python -u run_multar_gnia.py --suffix gcn_multarnum3 --tar_num 3 --multiedge True --nepochs 10000 --lr 1e-5 --connect True --epsst 50 --epsdec 1 --patience 500 --dataset citeseer --attrtau 1 --edgetau 0.01 --surro_type gcn --victim_type gcn --batchsize 32 --gpu 1 > log/citeseer_gcn_multarnum3.log 2>&1 &
'''